RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 LPIN3Q9BQK8 851 aa9.44□□□□□ -0.9
TRAPPC1-202ENST00000540486 SEMA4CQ9C0C4 833 aa9.44□□□□□ -0.9
TRAPPC1-202ENST00000540486 GAREM1Q9H706 876 aa9.44□□□□□ -0.9
TRAPPC1-202ENST00000540486 PDE11AQ9HCR9 933 aa9.44□□□□□ -0.9
TRAPPC1-202ENST00000540486 UBQLN1Q9UMX0 589 aaKnown RBP9.44□□□□□ -0.9
TRAPPC1-202ENST00000540486 TRAF3IP3Q9Y228 551 aa9.44□□□□□ -0.9
TRAPPC1-202ENST00000540486 NFE2L3Q9Y4A8 694 aa9.44□□□□□ -0.9
TRAPPC1-202ENST00000540486 AK5Q9Y6K8 562 aa9.44□□□□□ -0.9
TRAPPC1-202ENST00000540486 UBE4BO95155 1302 aa9.44□□□□□ -0.9
TRAPPC1-202ENST00000540486 PTPRDP23468 1912 aa9.44□□□□□ -0.9
TRAPPC1-202ENST00000540486 IGHV1OR15-9A0A0B4J2B8 117 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 A0A1B0GTW7 788 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 ANO9A1A5B4 782 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 ZNF233A6NK53 670 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 ENO4A6NNW6 628 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 PIRO00625 290 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 KIAA0391O15091 583 aaKnown RBP9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 ZBTB24O43167 697 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 CILPO75339 1184 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 SOAT2O75908 522 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 NFATC1O95644 943 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 F11P03951 625 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 CDK4P11802 303 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 GP1BBP13224 206 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 JUPP14923 745 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 HNF1BP35680 557 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 MATKP42679 507 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 PRCPP42785 496 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 CASP4P49662 377 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 CYP2J2P51589 502 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 UCNP55089 124 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 NLRP12P59046 1061 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 ZNF77Q15935 545 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 PTPRNQ16849 979 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 ZNF658Q5TYW1 1059 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 TXNDC8Q6A555 127 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 TMEM150AQ86TG1 271 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 RETREG3Q86VR2 466 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 GUF1Q8N442 669 aaKnown RBP9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 XXYLT1Q8NBI6 393 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 CXorf38Q8TB03 319 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 PLEKHO2Q8TD55 490 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 SMARCE1Q969G3 411 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 CCDC34Q96HJ3 373 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 TMEM176AQ96HP8 235 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 GZF1Q9H116 711 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 RBAKQ9NYW8 714 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 CGNQ9P2M7 1197 aaKnown RBP9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 ANKMY1Q9P2S6 941 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 MAN1B1Q9UKM7 699 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 DERAQ9Y315 318 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 C2CD2Q9Y426 696 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 PLXND1Q9Y4D7 1925 aa9.43□□□□□ -0.9
TRAPPC1-202ENST00000540486 ANK1P16157 1881 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 ANKRD17O75179 2603 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 PTPRJQ12913 1337 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 ANTXRLA6NF34 631 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 ADAM23O75077 832 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 NDUFS2O75306 463 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 IL18RAPO95256 599 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 CST3P01034 146 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 ATF6P18850 670 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 TYMPP19971 482 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 ACTN2P35609 894 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 EIF2DP41214 584 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 TNFRSF4P43489 277 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 KIR2DL1P43626 348 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 PMS1P54277 932 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 KCNH2Q12809 1159 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 LY6DQ14210 128 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 TMEM132DQ14C87 1099 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 SNRNP35Q16560 246 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 CAMK4Q16566 473 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 MGAT5BQ3V5L5 792 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 COBLL1Q53SF7 1204 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 C9orf57Q5W0N0 161 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 OVOS1Q6IE37 1185 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 DHRS13Q6UX07 377 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 ZNF574Q6ZN55 896 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 HS2ST1Q7LGA3 356 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 TRMT11Q7Z4G4 463 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 NT5DC4Q86YG4 428 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 SLC9A9Q8IVB4 645 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 SPACA3Q8IXA5 215 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 TTC9BQ8N6N2 239 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 OR5B17Q8NGF7 314 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 NOC3LQ8WTT2 800 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 DNASE2BQ8WZ79 361 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 CCDC47Q96A33 483 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 PNKPQ96T60 521 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 SEPT5Q99719 369 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 SLC6A16Q9GZN6 736 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 KIAA1586Q9HCI6 787 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 DPP3Q9NY33 737 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 TIMM13Q9Y5L4 95 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 WNT6Q9Y6F9 365 aa9.42□□□□□ -0.9
TRAPPC1-202ENST00000540486 KIAA1549LQ6ZVL6 1849 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 EXOC3O60645 756 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 SMC2O95347 1197 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms