RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 LHX6Q9UPM6 363 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 SCML2Q9UQR0 700 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 ZNF510Q9Y2H8 683 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 CEP295Q9C0D2 2601 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 PLXND1Q9Y4D7 1925 aa13.17□□□□□ -0.3
COPS7A-211ENST00000540408 FRYQ5TBA9 3013 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.16□□□□□ -0.3
COPS7A-211ENST00000540408 PRRT4C9JH25 899 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 NPC1O15118 1278 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 BEST1O76090 585 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 CD59P13987 128 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 ADORA2BP29275 332 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 CD6P30203 668 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 CHKAP35790 457 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 AFMP43652 599 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 PSEN1P49768 467 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 C10orf120Q5SQS8 335 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 KLHDC10Q6PID8 442 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 SHC4Q6S5L8 630 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 CEP57L1Q8IYX8 460 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 ZMIZ2Q8NF64 920 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 UCMAQ8WVF2 138 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 ERLEC1Q96DZ1 483 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 CDK5RAP1Q96SZ6 601 aaKnown RBP13.16□□□□□ -0.3
COPS7A-211ENST00000540408 SDCBP2Q9H190 292 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 FAM49BQ9NUQ9 324 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 CACNA2D2Q9NY47 1150 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 HCN2Q9UL51 889 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 PCDHA5Q9Y5H7 936 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 PI4KAP42356 2102 aa13.16□□□□□ -0.3
COPS7A-211ENST00000540408 MYO18AQ92614 2054 aaKnown RBP13.16□□□□□ -0.3
COPS7A-211ENST00000540408 TNRC6BQ9UPQ9 1833 aaKnown RBP13.16□□□□□ -0.3
COPS7A-211ENST00000540408 CACNA1GO43497 2377 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 PCNX2A6NKB5 2137 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 GON4LQ3T8J9 2241 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 MEI4A8MW99 385 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 SH3BP5O60239 455 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 SYNCRIPO60506 623 aaKnown RBP13.15□□□□□ -0.3
COPS7A-211ENST00000540408 GREM1O60565 184 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 RALAP11233 206 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 RARGP13631 454 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 ACO1P21399 889 aaKnown RBP13.15□□□□□ -0.3
COPS7A-211ENST00000540408 OXTRP30559 389 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 COG7P83436 770 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 RING1Q06587 406 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 TOGARAM2Q6ZUX3 1019 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 RAB44Q7Z6P3 723 aaPredicted RBP13.15□□□□□ -0.3
COPS7A-211ENST00000540408 METTL3Q86U44 580 aaKnown RBP13.15□□□□□ -0.3
COPS7A-211ENST00000540408 SLC9A9Q8IVB4 645 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 C12orf29Q8N999 325 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 OR2I1PQ8NGU4 316 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 BHMTQ93088 406 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 JAKMIP2Q96AA8 810 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 CYFIP2Q96F07 1278 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 HNRNPABQ99729 332 aaKnown RBP13.15□□□□□ -0.3
COPS7A-211ENST00000540408 PRDM16Q9HAZ2 1276 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 PNPLA8Q9NP80 782 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 NAGPAQ9UK23 515 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 APOBEC2Q9Y235 224 aaKnown RBP13.15□□□□□ -0.3
COPS7A-211ENST00000540408 FRMD4BQ9Y2L6 1034 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 NFE2L3Q9Y4A8 694 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 RAD54BQ9Y620 910 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 FAM208BQ5VWN6 2430 aa13.15□□□□□ -0.3
COPS7A-211ENST00000540408 CEP192Q8TEP8 1941 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 A0A1B0GTW7 788 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 A0A1W2PQH9 124 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 WASH3PC4AMC7 463 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 IKBKBO14920 756 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 CYP26A1O43174 497 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 VNN1O95497 513 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 CISD3P0C7P0 127 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 ACADMP11310 421 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 PDIA4P13667 645 aaKnown RBP13.14□□□□□ -0.31
COPS7A-211ENST00000540408 MAOBP27338 520 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 CASP1P29466 404 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 PIK3CAP42336 1068 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 ME1P48163 572 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 PGFP49763 221 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 FAM193AP78312 1265 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 ORC1Q13415 861 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 CUL4BQ13620 913 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 ZACNQ401N2 412 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 CLEC20AQ6ZU45 233 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 NAXDQ8IW45 347 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 CCDC150Q8NCX0 1101 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 CADM4Q8NFZ8 388 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 PLEKHO2Q8TD55 490 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 TMC2Q8TDI7 906 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 ADAMTS14Q8WXS8 1223 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 ELMO3Q96BJ8 720 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 TOE1Q96GM8 510 aaKnown RBP13.14□□□□□ -0.31
COPS7A-211ENST00000540408 NT5C1AQ9BXI3 368 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 DCLK3Q9C098 648 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 SLC6A17Q9H1V8 727 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 CD248Q9HCU0 757 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 ITM2CQ9NQX7 267 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 EXOC1Q9NV70 894 aa13.14□□□□□ -0.31
COPS7A-211ENST00000540408 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.14□□□□□ -0.31
COPS7A-211ENST00000540408 PLK2Q9NYY3 685 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms