RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 CELSR3Q9NYQ7 3312 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 VWA8A3KMH1 1905 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 THADAQ6YHU6 1953 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 ABCA7Q8IZY2 2146 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 TENM4Q6N022 2769 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 URB1O60287 2271 aaKnown RBP4.35□□□□□ -1.71
C2CD3-214ENST00000540057 KIF26AQ9ULI4 1882 aaPredicted RBP4.35□□□□□ -1.71
C2CD3-214ENST00000540057 SLC38A8A6NNN8 435 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 H0Y626 953 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 ZNF263O14978 683 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 DCLK1O15075 740 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 MEFVO15553 781 aaPredicted RBP4.35□□□□□ -1.71
C2CD3-214ENST00000540057 ADAM12O43184 909 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 TRIM16O95361 564 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 THBDP07204 575 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 PSMC3P17980 439 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 SFPQP23246 707 aaKnown RBP eCLIP4.35□□□□□ -1.71
C2CD3-214ENST00000540057 KIF5BP33176 963 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 VIPR2P41587 438 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 FAM193AP78312 1265 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 IRX4P78413 519 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 CREMQ03060 361 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 SRSF1Q07955 248 aaKnown RBP eCLIP4.35□□□□□ -1.71
C2CD3-214ENST00000540057 ELF2Q15723 593 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 INF2Q27J81 1249 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 SPATS1Q496A3 300 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 DGKKQ5KSL6 1271 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 UBXN11Q5T124 520 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 MIS18BP1Q6P0N0 1132 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 C1orf228Q6PIY5 440 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 DBX2Q6ZNG2 339 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 FERMT3Q86UX7 667 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 ZNF761Q86XN6 746 aaPredicted RBP4.35□□□□□ -1.71
C2CD3-214ENST00000540057 MIB1Q86YT6 1006 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 TRIM59Q8IWR1 403 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 BVESQ8NE79 360 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 LNX1Q8TBB1 728 aaPredicted RBP4.35□□□□□ -1.71
C2CD3-214ENST00000540057 FRS2Q8WU20 508 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 DEPDC1BQ8WUY9 529 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 RABGGTAQ92696 567 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 MRRFQ96E11 262 aaKnown RBP4.35□□□□□ -1.71
C2CD3-214ENST00000540057 MSANTD3Q96H12 275 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 SEC16BQ96JE7 1060 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 GORASP1Q9BQQ3 440 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 UBAC1Q9BSL1 405 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 COLEC11Q9BWP8 271 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 LNPKQ9C0E8 428 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 PSTPIP2Q9H939 334 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 GPRC5CQ9NQ84 441 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 MIOSQ9NXC5 875 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 MARCH2Q9P0N8 246 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 DDX19BQ9UMR2 479 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 CNTNAP2Q9UHC6 1331 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 CACNA1EQ15878 2313 aa4.35□□□□□ -1.71
C2CD3-214ENST00000540057 PTPRBP23467 1997 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 ACACAQ13085 2346 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 A0A087WV48 116 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 CCDC194A0A1B0GVG4 234 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 WDR27A2RRH5 827 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 MYBPHLA2RUH7 354 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 SPECC1L-ADORA2AF8WAN1 911 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 SGSM2O43147 1006 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 TBX1O43435 398 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 RHOBTB1O94844 696 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 FUCA1P04066 466 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 RDXP35241 583 aaKnown RBP4.34□□□□□ -1.71
C2CD3-214ENST00000540057 MLH1P40692 756 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 CCR2P41597 374 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 SCNN1GP51170 649 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 KPNA1P52294 538 aaPredicted RBP4.34□□□□□ -1.71
C2CD3-214ENST00000540057 ZNF143P52747 638 aaPredicted RBP4.34□□□□□ -1.71
C2CD3-214ENST00000540057 PLP2Q04941 152 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 SEMA3BQ13214 749 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 PON2Q15165 354 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 CEP55Q53EZ4 464 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 GTF2IRD2BQ6EKJ0 949 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 CCNI2Q6ZMN8 369 aaPredicted RBP4.34□□□□□ -1.71
C2CD3-214ENST00000540057 CYB5R4Q7L1T6 521 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 CATSPER4Q7RTX7 472 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 GTF2IRD2Q86UP8 949 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 DCP2Q8IU60 420 aaKnown RBP4.34□□□□□ -1.71
C2CD3-214ENST00000540057 CCDC103Q8IW40 242 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 TEX2Q8IWB9 1127 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 MFSD6LQ8IWD5 586 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 Q8N1Y9 231 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 SYNPOQ8N3V7 929 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 CSGALNACT1Q8TDX6 532 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 ZBTB8AQ96BR9 441 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 EVI5LQ96CN4 794 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 TCEAL4Q96EI5 215 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 RRP36Q96EU6 259 aaKnown RBP4.34□□□□□ -1.71
C2CD3-214ENST00000540057 PGBD1Q96JS3 809 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 ZSWIM3Q96MP5 696 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 GAD1Q99259 594 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 APOL6Q9BWW8 343 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 KRT23Q9C075 422 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 INO80BQ9C086 356 aaPredicted RBP4.34□□□□□ -1.71
C2CD3-214ENST00000540057 TGIF2Q9GZN2 237 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 ACBD3Q9H3P7 528 aa4.34□□□□□ -1.71
C2CD3-214ENST00000540057 CLMPQ9H6B4 373 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms