RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 NPY6RQ99463 290 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 GDF15Q99988 308 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 BRD8Q9H0E9 1235 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 RAB17Q9H0T7 212 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 TSPYL1Q9H0U9 437 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 ASAH2Q9NR71 780 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.28□□□□□ -0.44
VTN-202ENST00000539746 LMCD1Q9NZU5 365 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 DNMT3LQ9UJW3 386 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 YIPF1Q9Y548 306 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 NME7Q9Y5B8 376 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 INSL5Q9Y5Q6 135 aa12.28□□□□□ -0.44
VTN-202ENST00000539746 TARSL2A2RTX5 802 aaKnown RBP12.27□□□□□ -0.45
VTN-202ENST00000539746 CFAP69A5D8W1 941 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 F8W810 466 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 FGF10O15520 208 aaPredicted RBP12.27□□□□□ -0.45
VTN-202ENST00000539746 DAPK3O43293 454 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 LILRB3O75022 631 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 ERLIN1O75477 346 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 STK10O94804 968 aaKnown RBP12.27□□□□□ -0.45
VTN-202ENST00000539746 TRUB2O95900 331 aaKnown RBP12.27□□□□□ -0.45
VTN-202ENST00000539746 FGGP02679 453 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 CA3P07451 260 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 DNAJB2P25686 324 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 MIPP30301 263 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 SLC11A2P49281 568 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 HARS2P49590 506 aaKnown RBP12.27□□□□□ -0.45
VTN-202ENST00000539746 PEX5P50542 639 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 ATP11AP98196 1134 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 SHHQ15465 462 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 CCDC14Q49A88 953 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 TMEM173Q86WV6 379 aaPredicted RBP12.27□□□□□ -0.45
VTN-202ENST00000539746 LRRC49Q8IUZ0 686 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 CCDC117Q8IWD4 279 aaPredicted RBP12.27□□□□□ -0.45
VTN-202ENST00000539746 LZTR1Q8N653 840 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 KREMEN2Q8NCW0 462 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 BBOF1Q8ND07 529 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 ZMIZ2Q8NF64 920 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 CMASQ8NFW8 434 aaPredicted RBP12.27□□□□□ -0.45
VTN-202ENST00000539746 MYRIPQ8NFW9 859 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 SPPL3Q8TCT6 385 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 BCL7CQ8WUZ0 217 aaPredicted RBP12.27□□□□□ -0.45
VTN-202ENST00000539746 CASP10Q92851 521 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 PLD4Q96BZ4 506 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 LRRC45Q96CN5 670 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 CFAP57Q96MR6 1250 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 PPP1R2P1Q96PQ5 205 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 CATSPERBQ9H7T0 1116 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 TMLHEQ9NVH6 421 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 LSM7Q9UK45 103 aaKnown RBP12.27□□□□□ -0.45
VTN-202ENST00000539746 FBXW11Q9UKB1 542 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 TFR2Q9UP52 801 aa12.27□□□□□ -0.45
VTN-202ENST00000539746 C2orf71A6NGG8 1288 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 YJEFN3A6XGL0 299 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 E7ENQ6 273 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 TULP2O00295 520 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 FSCN2O14926 492 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 DDX3YO15523 660 aaKnown RBP12.26□□□□□ -0.45
VTN-202ENST00000539746 MTSS1O43312 755 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 HCRTO43612 131 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 CNPP09543 421 aaKnown RBP12.26□□□□□ -0.45
VTN-202ENST00000539746 OR4Q2P0C623 313 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 MX2P20592 715 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 TGM2P21980 687 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 FLT3P36888 993 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 DNA2P51530 1060 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 DPYSL2Q16555 572 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 DDR2Q16832 855 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 CDO1Q16878 200 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 C2CD6Q53TS8 623 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 TTC39BQ5VTQ0 682 aaPredicted RBP12.26□□□□□ -0.45
VTN-202ENST00000539746 C8orf74Q6P047 294 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 TAS1R1Q7RTX1 841 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 SLC13A5Q86YT5 568 aaPredicted RBP12.26□□□□□ -0.45
VTN-202ENST00000539746 CREG2Q8IUH2 290 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 GPR161Q8N6U8 529 aaKnown RBP12.26□□□□□ -0.45
VTN-202ENST00000539746 EMC1Q8N766 993 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 EIF1ADQ8N9N8 165 aaKnown RBP12.26□□□□□ -0.45
VTN-202ENST00000539746 SPATA4Q8NEY3 305 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 JOSD2Q8TAC2 188 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 AZIN2Q96A70 460 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 BTN2A3PQ96KV6 586 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 CAPZA3Q96KX2 299 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 C1orf74Q96LT6 269 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 KLHL5Q96PQ7 755 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 TMEM209Q96SK2 561 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 CALN1Q9BXU9 219 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 RHOBTB2Q9BYZ6 727 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 OSBPL8Q9BZF1 889 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 OSBPL2Q9H1P3 480 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.26□□□□□ -0.45
VTN-202ENST00000539746 AP4E1Q9UPM8 1137 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 UTP11Q9Y3A2 253 aaKnown RBP12.26□□□□□ -0.45
VTN-202ENST00000539746 TET1Q8NFU7 2136 aa12.26□□□□□ -0.45
VTN-202ENST00000539746 FAM187AA6NFU0 413 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 SMAPO00193 183 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 TGM5O43548 720 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 GRAP2O75791 330 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 BEST1O76090 585 aa12.25□□□□□ -0.45
VTN-202ENST00000539746 ABL1P00519 1130 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms