RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 MLH1P40692 756 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 SLC12A2P55011 1212 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 POLE2P56282 527 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 PPP2CBP62714 309 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 PPP2CAP67775 309 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 CCT2P78371 535 aaKnown RBP4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 CREB5Q02930 508 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 PPARAQ07869 468 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 MALLQ13021 153 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 IFT88Q13099 833 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 CHAF1BQ13112 559 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 TUSC3Q13454 348 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 PRKD1Q15139 912 aaPredicted RBP4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 SF3B3Q15393 1217 aaKnown RBP4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 NRN1LQ496H8 165 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 CTXN3Q4LDR2 81 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 C1orf141Q5JVX7 400 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 SLC9C2Q5TAH2 1124 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 SLFN12LQ6IEE8 588 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 KIAA1841Q6NSI8 718 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 BBS12Q6ZW61 710 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 CHD1LQ86WJ1 897 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 Q8N1Y9 231 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 SPC24Q8NBT2 197 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 PPP1R14CQ8TAE6 165 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 GSDMBQ8TAX9 411 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 ZNF606Q8WXB4 792 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 SEC14L1Q92503 715 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 ZG16BQ96DA0 208 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 IQCDQ96DY2 449 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 FAM167AQ96KS9 214 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 GPR63Q9BZJ6 419 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 TMEM168Q9H0V1 697 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 CDIP1Q9H305 208 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 RNPEPQ9H4A4 650 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 EPS8L2Q9H6S3 715 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 ARMT1Q9H993 441 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 SARS2Q9NP81 518 aaKnown RBP4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 RABL2AQ9UBK7 228 aaPredicted RBP4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 TBX20Q9UMR3 447 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 USP18Q9UMW8 372 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 PCDHGB4Q9UN71 923 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 DUSP12Q9UNI6 340 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 CNPY2Q9Y2B0 182 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 ASB1Q9Y576 335 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 MYO5BQ9ULV0 1848 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 PTPRUQ92729 1446 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 CDC42BPAQ5VT25 1732 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 PARP4Q9UKK3 1724 aaKnown RBP4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 ASPMQ8IZT6 3477 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 TCRBV5S4A2TA0A5A2 114 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 FAM234BA2RU67 622 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 PRAMEF22A3QJZ6 481 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 CLCA1A8K7I4 914 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 H3BUI4 141 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 GPR42O15529 346 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 MTSS1O43312 755 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 B4GALT3O60512 393 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 CYP7B1O75881 506 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 TNFRSF6BO95407 300 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 GUCA1CO95843 209 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 KRT13P13646 458 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 GSPT1P15170 499 aaKnown RBP4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 AOAHP28039 575 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 KRT2P35908 639 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 HADHAP40939 763 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 HK3P52790 923 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 SEC24CP53992 1094 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 NLRP5P59047 1200 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 NKX6-1P78426 367 aaPredicted RBP4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 HMGN5P82970 282 aaKnown RBP4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 IL1RL1Q01638 556 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 MC1RQ01726 317 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 SLC6A3Q01959 620 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 DSC2Q02487 901 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 MAP3K12Q12852 859 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 FOXE3Q13461 319 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 SLC12A1Q13621 1099 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 SEMA3AQ14563 771 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 PPA1Q15181 289 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 RAB30Q15771 203 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 ATP2B3Q16720 1220 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 TMEM266Q2M3C6 531 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 FLYWCH1Q4VC44 716 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 CCDC178Q5BJE1 867 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 PITRM1Q5JRX3 1037 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 CATSPEREQ5SY80 951 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 SLFN13Q68D06 897 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 NFRKBQ6P4R8 1299 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 FBXO38Q6PIJ6 1188 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 CATSPERGQ6ZRH7 1159 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 OTUD6AQ7L8S5 288 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 PTF1AQ7RTS3 328 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 NUP54Q7Z3B4 507 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 SLFN11Q7Z7L1 901 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 RSPH3Q86UC2 560 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 CEP97Q8IW35 865 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 CDYL2Q8N8U2 506 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 KCTD6Q8NC69 237 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms