RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 FAM189A1O60320 539 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 PHACTR2O75167 634 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 DKK1O94907 266 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 KLF8O95600 359 aaPredicted RBP13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 TCF3P15923 654 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 KIR2DL1P43626 348 aaPredicted RBP13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 GPR15P49685 360 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 TFAMQ00059 246 aaKnown RBP13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 UBXN1Q04323 297 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 ENPEPQ07075 957 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 KCNH2Q12809 1159 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 NR1H3Q13133 447 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 BIRC3Q13489 604 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 CAMK2BQ13554 666 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 TMPRSS7Q7RTY8 843 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 SCUBE3Q8IX30 993 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 DEFB119Q8N690 84 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 SLC39A7Q92504 469 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 MYRFLQ96LU7 910 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 CGRRF1Q99675 332 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 NDST4Q9H3R1 872 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 ASB7Q9H672 318 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 TMLHEQ9NVH6 421 aa13.24□□□□□ -0.29
CLSTN3-208ENST00000538933 CABIN1Q9Y6J0 2220 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 ANO9A1A5B4 782 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 LRRIQ3A6PVS8 624 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 AP5Z1O43299 807 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 NOL4O94818 638 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 USP17L7P0C7H9 530 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 PAX3P23760 479 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 SLC6A11P48066 632 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 MXI1P50539 228 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 AP3M2P53677 418 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 MYL7Q01449 175 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 ZNF33AQ06730 810 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 CYP4F3Q08477 520 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 SMARCB1Q12824 385 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 BYSLQ13895 437 aaKnown RBP13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 TMEM132DQ14C87 1099 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 HSF5Q4G112 596 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 C9orf57Q5W0N0 161 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 LMBRD2Q68DH5 695 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 SARM1Q6SZW1 724 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 MARCH9Q86YJ5 346 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 WDR49Q8IV35 697 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 SLC41A1Q8IVJ1 513 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 NAXDQ8IW45 347 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 DRC7Q8IY82 874 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 SH3RF2Q8TEC5 729 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 PARD3BQ8TEW8 1205 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 HMGB4Q8WW32 186 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 TRMT2BQ96GJ1 504 aaKnown RBP13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 XPO4Q9C0E2 1151 aaKnown RBP13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 TOR4AQ9NXH8 423 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 ABI2Q9NYB9 513 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 PCDHB9Q9Y5E1 797 aa13.23□□□□□ -0.29
CLSTN3-208ENST00000538933 UNC79Q9P2D8 2635 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 TRABD2BA6NFA1 517 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 LGALS16A8MUM7 142 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 ATXN7O15265 892 aaPredicted RBP13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 SYPP08247 313 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 CSH1P0DML2 217 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 CSH2P0DML3 217 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 GTF2H1P32780 548 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 TIE1P35590 1138 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 GCLMP48507 274 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 FMO5P49326 533 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 DLG4P78352 724 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 RPL6Q02878 288 aaKnown RBP13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 TRPC3Q13507 836 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 DUOXA2Q1HG44 320 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 SDHAF4Q5VUM1 108 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 KRT39Q6A163 491 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 JADE1Q6IE81 842 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 RABEPKQ7Z6M1 372 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 NT5DC4Q86YG4 428 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 ADGRG2Q8IZP9 1017 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 CCDC150Q8NCX0 1101 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 SLC35C1Q96A29 364 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 TSPAN18Q96SJ8 248 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 TMEM8AQ9HCN3 771 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 ZDHHC4Q9NPG8 344 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 PCOLCE2Q9UKZ9 415 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 MAGED2Q9UNF1 606 aaPredicted RBP13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 APOBEC2Q9Y235 224 aaKnown RBP13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 RAI2Q9Y5P3 530 aa13.22□□□□□ -0.29
CLSTN3-208ENST00000538933 TRAV19A0A0A6YYK7 116 aa13.21□□□□□ -0.29
CLSTN3-208ENST00000538933 A0A1B0GTH6 734 aa13.21□□□□□ -0.29
CLSTN3-208ENST00000538933 C2orf78A6NCI8 922 aa13.21□□□□□ -0.29
CLSTN3-208ENST00000538933 GOLGA6L6A8MZA4 724 aa13.21□□□□□ -0.29
CLSTN3-208ENST00000538933 NFATC1O95644 943 aa13.21□□□□□ -0.29
CLSTN3-208ENST00000538933 CKMP06732 381 aa13.21□□□□□ -0.29
CLSTN3-208ENST00000538933 NFICP08651 508 aa13.21□□□□□ -0.29
CLSTN3-208ENST00000538933 KRT19P08727 400 aa13.21□□□□□ -0.29
CLSTN3-208ENST00000538933 PIK3CAP42336 1068 aa13.21□□□□□ -0.29
CLSTN3-208ENST00000538933 WSCD1Q658N2 575 aa13.21□□□□□ -0.29
CLSTN3-208ENST00000538933 GBP6Q6ZN66 633 aa13.21□□□□□ -0.29
CLSTN3-208ENST00000538933 ZNF843Q8N446 348 aa13.21□□□□□ -0.29
CLSTN3-208ENST00000538933 ARL14EPQ8N8R7 260 aaPredicted RBP13.21□□□□□ -0.29
CLSTN3-208ENST00000538933 TTC16Q8NEE8 873 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms