RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TNIP3Q96KP6 325 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 USP28Q96RU2 1077 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 SMOQ99835 787 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 KLF16Q9BXK1 252 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 MIR1-1HGQ9H1L0 117 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 TNMDQ9H2S6 317 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 TLR8Q9NR97 1041 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 PLK2Q9NYY3 685 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 WDR35Q9P2L0 1181 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 LSM7Q9UK45 103 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 FAM92AA1XBS5 289 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 PDCP20941 246 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 CD6P30203 668 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 MAP3K7CLP57077 242 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 GOLGA8FQ08AF8 430 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 GOLGA8DPQ0D2H9 430 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 FUT11Q495W5 492 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 ZNF667Q5HYK9 610 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 CCNI2Q6ZMN8 369 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 ZNF507Q8TCN5 953 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 SLC2A14Q8TDB8 520 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 SETD7Q8WTS6 366 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 TOE1Q96GM8 510 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 GPR174Q9BXC1 333 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 SDCBP2Q9H190 292 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 IL21RQ9HBE5 538 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 FAM49BQ9NUQ9 324 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 OSER1Q9NX31 292 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 HMGXB4Q9UGU5 601 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 NUDT5Q9UKK9 219 aa14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 APOBEC2Q9Y235 224 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-206ENST00000538456 GOLGA4Q13439 2230 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 MDM4O15151 490 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 CYP26A1O43174 497 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 NCAM1P13591 858 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 ATP5C1P36542 298 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 STARD3Q14849 445 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 SLC39A14Q15043 492 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 SOWAHCQ53LP3 525 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 GPRIN1Q7Z2K8 1008 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 SLCO6A1Q86UG4 719 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 CACUL1Q86Y37 369 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 HNRNPLLQ8WVV9 542 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 DHX58Q96C10 678 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 ZDHHC5Q9C0B5 715 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 LRRC27Q9C0I9 530 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 FBXO44Q9H4M3 255 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 PRDM16Q9HAZ2 1276 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.78□□□□□ -0.045e-9■■■■■ 219
SMARCA4-206ENST00000538456 KBTBD4Q9NVX7 518 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 COMMD8Q9NX08 183 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 MARK1Q9P0L2 795 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 PCOLCE2Q9UKZ9 415 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 RAXQ9Y2V3 346 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 STON1Q9Y6Q2 735 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 KNL1Q8NG31 2342 aa14.78□□□□□ -0.04
SMARCA4-206ENST00000538456 BPTFQ12830 3046 aa14.77□□□□□ -0.04
SMARCA4-206ENST00000538456 UBE4BO95155 1302 aa14.77□□□□□ -0.04
SMARCA4-206ENST00000538456 A0A1B0GTW7 788 aa14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 GFRA2O00451 464 aa14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 EXOC3O60645 756 aa14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 CBFA2T3O75081 653 aa14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 CISD3P0C7P0 127 aa14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 ADORA2BP29275 332 aa14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 NCOA4Q13772 614 aa14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 E2F4Q16254 413 aa14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 C12orf29Q8N999 325 aa14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 PLEKHO2Q8TD55 490 aa14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 P2RY11Q96G91 374 aa14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 MKRN2Q9H000 416 aaKnown RBP14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 GAREM1Q9H706 876 aa14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 UPF2Q9HAU5 1272 aaKnown RBP14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 CYLDQ9NQC7 956 aa14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 FNDC3AQ9Y2H6 1198 aaKnown RBP14.77□□□□□ -0.05
SMARCA4-206ENST00000538456 TMEM131Q92545 1883 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 GOLGA8CPA6NN73 597 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 LRRIQ3A6PVS8 624 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 KCNJ18B7U540 433 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 SYT1P21579 422 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 CASP1P29466 404 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 NDST1P52848 882 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 AMPD3Q01432 767 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 STK38Q15208 465 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 C10orf120Q5SQS8 335 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 DCAF12L1Q5VU92 463 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 MARCH9Q86YJ5 346 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 DNASE2BQ8WZ79 361 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 LRIG1Q96JA1 1093 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 VRTNQ9H8Y1 702 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 NMUR1Q9HB89 426 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 CSNK1G1Q9HCP0 422 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 WSB2Q9NYS7 404 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 USP36Q9P275 1121 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 CKAP5Q14008 2032 aa14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 URB1O60287 2271 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-206ENST00000538456 NUMA1Q14980 2115 aa14.75□□□□□ -0.05
SMARCA4-206ENST00000538456 A0A1W2PQH9 124 aa14.75□□□□□ -0.05
SMARCA4-206ENST00000538456 BCAT2O15382 392 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-206ENST00000538456 CILPO75339 1184 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms