RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 LIMS2Q7Z4I7 341 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 FAM124AQ86V42 546 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 SFR1Q86XK3 245 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 KRI1Q8N9T8 703 aaKnown RBP11.81□□□□□ -0.52
CLPB-208ENST00000538021 C1orf216Q8TAB5 229 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 SCAMP5Q8TAC9 235 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 OVCA2Q8WZ82 227 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 RAD54LQ92698 747 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 PRCCQ92733 491 aaPredicted RBP11.81□□□□□ -0.52
CLPB-208ENST00000538021 HVCN1Q96D96 273 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 ARID3AQ99856 593 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 MRPL45Q9BRJ2 306 aaKnown RBP11.81□□□□□ -0.52
CLPB-208ENST00000538021 NUP58Q9BVL2 599 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 DPEP3Q9H4B8 488 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 PCIF1Q9H4Z3 704 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 MRPL44Q9H9J2 332 aaKnown RBP11.81□□□□□ -0.52
CLPB-208ENST00000538021 TBC1D7Q9P0N9 293 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 LIMCH1Q9UPQ0 1083 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 ANKRD6Q9Y2G4 727 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 SLCO1B1Q9Y6L6 691 aa11.81□□□□□ -0.52
CLPB-208ENST00000538021 PTPRQQ9UMZ3 2332 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 PYCARD-AS1I3L0S3 204 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 CISD3P0C7P0 127 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 PTPN1P18031 435 aaKnown RBP11.8□□□□□ -0.52
CLPB-208ENST00000538021 IL12RB1P42701 662 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 CXADRP78310 365 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 RILPL1Q5EBL4 403 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 LAYNQ6UX15 382 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 DYMQ7RTS9 669 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 SYCP3Q8IZU3 236 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 OR5B17Q8NGF7 314 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 AK8Q96MA6 479 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 ACCSQ96QU6 501 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 KCNK16Q96T55 309 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 DUSP9Q99956 384 aaKnown RBP11.8□□□□□ -0.52
CLPB-208ENST00000538021 B3GNT5Q9BYG0 378 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 CLMPQ9H6B4 373 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 INTS13Q9NVM9 706 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 PLK2Q9NYY3 685 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 NME7Q9Y5B8 376 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 PTPRJQ12913 1337 aa11.8□□□□□ -0.52
CLPB-208ENST00000538021 TMEM131Q92545 1883 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 H0Y8X5 98 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 ARHGAP6O43182 974 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 SLC26A4O43511 780 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 PCDHGA12O60330 932 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 PPP1R37O75864 691 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 PRPF6O94906 941 aaKnown RBP11.79□□□□□ -0.52
CLPB-208ENST00000538021 GARTP22102 1010 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 TUBP50607 506 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 SLC5A3P53794 718 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 CCDC173Q0VFZ6 552 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 TARDBPQ13148 414 aaKnown RBP eCLIP11.79□□□□□ -0.52
CLPB-208ENST00000538021 INAVAQ3KP66 663 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 L1TD1Q5T7N2 865 aaKnown RBP11.79□□□□□ -0.52
CLPB-208ENST00000538021 SNX30Q5VWJ9 437 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 ARL6IP4Q66PJ3 421 aaKnown RBP11.79□□□□□ -0.52
CLPB-208ENST00000538021 PCSK4Q6UW60 755 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 HTR3DQ70Z44 454 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 ADAT2Q7Z6V5 191 aaKnown RBP11.79□□□□□ -0.52
CLPB-208ENST00000538021 LARP4BQ92615 738 aaKnown RBP11.79□□□□□ -0.52
CLPB-208ENST00000538021 IGSF8Q969P0 613 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 CBWD1Q9BRT8 395 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 C6orf106Q9H6K1 298 aaPredicted RBP11.79□□□□□ -0.52
CLPB-208ENST00000538021 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.79□□□□□ -0.52
CLPB-208ENST00000538021 MARK1Q9P0L2 795 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 DNMT3LQ9UJW3 386 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 LSM7Q9UK45 103 aaKnown RBP11.79□□□□□ -0.52
CLPB-208ENST00000538021 MYO18BQ8IUG5 2567 aa11.79□□□□□ -0.52
CLPB-208ENST00000538021 HECTD1Q9ULT8 2610 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 A8MXQ7 604 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 TLR5O60602 858 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 GCNT3O95395 438 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 TBX18O95935 607 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 ZNF132P52740 706 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 CDH8P55286 799 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 KCNC4Q03721 635 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 GOLGA8FQ08AF8 430 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 GOLGA8DPQ0D2H9 430 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 DUOXA2Q1HG44 320 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 UCMAQ8WVF2 138 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 FGF11Q92914 225 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 MED10Q9BTT4 135 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 KLF16Q9BXK1 252 aaPredicted RBP11.78□□□□□ -0.52
CLPB-208ENST00000538021 TM9SF3Q9HD45 589 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 THAP10Q9P2Z0 257 aaPredicted RBP11.78□□□□□ -0.52
CLPB-208ENST00000538021 PCDHGA1Q9Y5H4 931 aa11.78□□□□□ -0.52
CLPB-208ENST00000538021 ERVH48-1M5A8F1 160 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 CBX4O00257 560 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 ENC1O14682 589 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 GREM1O60565 184 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 TACC1O75410 805 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 RFPL3O75679 317 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 IGLV3-19P01714 112 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 EPHX1P07099 455 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 ZDHHC11BP0C7U3 371 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 GRIA4P48058 902 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 PGFP49763 221 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 TNNC1P63316 161 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 TLE3Q04726 772 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms