RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 HEATR6Q6AI08 1181 aaKnown RBP15.51■□□□□ 0.07
USP28-204ENST00000537642 ENOSF1Q7L5Y1 443 aa15.51■□□□□ 0.07
USP28-204ENST00000537642 SIX6OS1Q8N1H7 587 aa15.51■□□□□ 0.07
USP28-204ENST00000537642 SCML4Q8N228 414 aa15.51■□□□□ 0.07
USP28-204ENST00000537642 PHTF2Q8N3S3 785 aa15.51■□□□□ 0.07
USP28-204ENST00000537642 NAT16Q8N8M0 369 aa15.51■□□□□ 0.07
USP28-204ENST00000537642 USP33Q8TEY7 942 aa15.51■□□□□ 0.07
USP28-204ENST00000537642 SIX2Q9NPC8 291 aa15.51■□□□□ 0.07
USP28-204ENST00000537642 CNGB3Q9NQW8 809 aa15.51■□□□□ 0.07
USP28-204ENST00000537642 APEX2Q9UBZ4 518 aa15.51■□□□□ 0.07
USP28-204ENST00000537642 SLC8A2Q9UPR5 921 aa15.51■□□□□ 0.07
USP28-204ENST00000537642 EML5Q05BV3 1969 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 A0A0A0MRY4 1105 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 BECN2A8MW95 431 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 PIK3R2O00459 728 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 KAT7O95251 611 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 KLKB1P03952 638 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 APODP05090 189 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 HMBSP08397 361 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 CHRM1P11229 460 aaPredicted RBP15.5■□□□□ 0.07
USP28-204ENST00000537642 SEC13P55735 322 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 DAOAP59103 153 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 COG7P83436 770 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 KDSRQ06136 332 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 ARHGAP44Q17R89 818 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 ANO4Q32M45 955 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 BSPRYQ5W0U4 402 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 BTBD8Q5XKL5 378 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 RSRC2Q7L4I2 434 aaKnown RBP15.5■□□□□ 0.07
USP28-204ENST00000537642 SYT13Q7L8C5 426 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 WDR5BQ86VZ2 330 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 LONP2Q86WA8 852 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 FAM81BQ96LP2 452 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 TUBGCP2Q9BSJ2 902 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 ACP6Q9NPH0 428 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 ARHGEF4Q9NR80 690 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 SAMSN1Q9NSI8 373 aaKnown RBP15.5■□□□□ 0.07
USP28-204ENST00000537642 MARCH2Q9P0N8 246 aa15.5■□□□□ 0.07
USP28-204ENST00000537642 AJAP1Q9UKB5 411 aaPredicted RBP15.5■□□□□ 0.07
USP28-204ENST00000537642 SMG5Q9UPR3 1016 aaKnown RBP15.5■□□□□ 0.07
USP28-204ENST00000537642 SLC12A8A0AV02 714 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.49■□□□□ 0.07
USP28-204ENST00000537642 GOLGA6L22H0YM25 854 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 HRO43593 1189 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 TULP3O75386 442 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 LETM1O95202 739 aaPredicted RBP15.49■□□□□ 0.07
USP28-204ENST00000537642 PRKCSHP14314 528 aaPredicted RBP15.49■□□□□ 0.07
USP28-204ENST00000537642 GRIA2P42262 883 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 GPD2P43304 727 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 PXNP49023 591 aaPredicted RBP15.49■□□□□ 0.07
USP28-204ENST00000537642 SRSF5Q13243 272 aaKnown RBP15.49■□□□□ 0.07
USP28-204ENST00000537642 DMC1Q14565 340 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 VWA3BQ502W6 1294 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 C2orf27AQ580R0 203 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 DENND1BQ6P3S1 775 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 TPGS1Q6ZTW0 290 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 CCDC26Q8TAB7 109 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 CLEC4CQ8WTT0 213 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 SHC3Q92529 594 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 EDEM1Q92611 657 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 ACDQ96AP0 544 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 P2RY11Q96G91 374 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 HSFY1Q96LI6 401 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 HHIPQ96QV1 700 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 NDST4Q9H3R1 872 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 OLA1Q9NTK5 396 aaKnown RBP15.49■□□□□ 0.07
USP28-204ENST00000537642 MARK1Q9P0L2 795 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 STRIP2Q9ULQ0 834 aa15.49■□□□□ 0.07
USP28-204ENST00000537642 KCNJ18B7U540 433 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 NEDD8-MDP1E9PL57 170 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 TRIM24O15164 1050 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 THAP12O43422 761 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 CACNG3O60359 315 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 TYRP14679 529 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 GNA15P30679 374 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 CORO1AP31146 461 aaKnown RBP15.48■□□□□ 0.07
USP28-204ENST00000537642 RPL34P49207 117 aaKnown RBP15.48■□□□□ 0.07
USP28-204ENST00000537642 MRPS21P82921 87 aaKnown RBP15.48■□□□□ 0.07
USP28-204ENST00000537642 KCNJ12Q14500 433 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 EMC10Q5UCC4 262 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 DPY19L2P1Q6NXN4 242 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 FMNL3Q8IVF7 1028 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 DCLK2Q8N568 766 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 CAMKK1Q8N5S9 505 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 ENOX1Q8TC92 643 aaKnown RBP15.48■□□□□ 0.07
USP28-204ENST00000537642 RNF139Q8WU17 664 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 ZNF606Q8WXB4 792 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 IRGQQ8WZA9 623 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 RUBCNQ92622 972 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 BBS2Q9BXC9 721 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 DCLK3Q9C098 648 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 ABCC13Q9NSE7 274 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 WDR35Q9P2L0 1181 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 DEC1Q9P2X7 70 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 SFMBT1Q9UHJ3 866 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 ZNF510Q9Y2H8 683 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 NFE2L3Q9Y4A8 694 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 SPAG17Q6Q759 2223 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 WDR87Q6ZQQ6 2873 aa15.48■□□□□ 0.07
USP28-204ENST00000537642 FRYLO94915 3013 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms