RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 COMMD8Q9NX08 183 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 PCSK1NQ9UHG2 260 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 SFMBT1Q9UHJ3 866 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 AMFRQ9UKV5 643 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 DDX3YO15523 660 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 F11P03951 625 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 MIPP30301 263 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 CXCR5P32302 372 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 CCR2P41597 374 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 SLC25A11Q02978 314 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 CYP4V2Q6ZWL3 525 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 GAREM2Q75VX8 874 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 BNIPLQ7Z465 357 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 ITIH5Q86UX2 942 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 CENPIQ92674 756 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 ZNF707Q96C28 371 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 HES6Q96HZ4 224 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 NAPGQ99747 312 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 APOL5Q9BWW9 433 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 TMPRSS4Q9NRS4 437 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 PIGVQ9NUD9 493 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 DNMT3BQ9UBC3 853 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 CDH22Q9UJ99 828 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 JRKLQ9Y4A0 524 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 CCDC195A0A1B0GUA6 201 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 CTAGE9A4FU28 777 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 C2orf78A6NCI8 922 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 SPDYE4A6NLX3 237 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 SRGAP2O75044 1071 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 MYL4P12829 197 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 GABRR2P28476 465 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 CYP4F8P98187 520 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 SMTNL2Q2TAL5 461 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 DCAF12L1Q5VU92 463 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 SCYL2Q6P3W7 929 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 TMC5Q6UXY8 1006 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 RSRC2Q7L4I2 434 aaKnown RBP16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 FAM131BQ86XD5 332 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 ARHGAP18Q8N392 663 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 TCEAL4Q96EI5 215 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 CALR3Q96L12 384 aaKnown RBP16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 MAGEB5Q9BZ81 275 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 FAM204AQ9H8W3 233 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 ZWILCHQ9H900 591 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 ANLNQ9NQW6 1124 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 DDIT4Q9NX09 232 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 ASB3Q9Y575 518 aa16.33■□□□□ 0.2
SFSWAP-206ENST00000537582 MTCL1Q9Y4B5 1905 aaKnown RBP16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 I6L893 689 aaPredicted RBP16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 TLR5O60602 858 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 TRUB2O95900 331 aaKnown RBP16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 C1RP00736 705 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 IGLV3-25P01717 112 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 SLC1A1P43005 524 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 DEUP1Q05D60 604 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 EFEMP1Q12805 493 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 SLC5A9Q2M3M2 681 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 KCNT1Q5JUK3 1230 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 STXBP5Q5T5C0 1151 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 AADACL2Q6P093 401 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 BEND5Q7L4P6 421 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 CCDC185Q8N715 623 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 RNF139Q8WU17 664 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 GPATCH2LQ9NWQ4 482 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 CLIC5Q9NZA1 410 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 TRPM5Q9NZQ8 1165 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 STAP1Q9ULZ2 295 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 MTCH2Q9Y6C9 303 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 MYO9BQ13459 2157 aa16.32■□□□□ 0.2
SFSWAP-206ENST00000537582 A0A1W2PRU2 124 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 ZNF185O15231 689 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 RNF8O76064 485 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 ENDOD1O94919 500 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 HOXA9P31269 272 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 CTNNA1P35221 906 aaKnown RBP16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 RDXP35241 583 aaKnown RBP16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 PEX5P50542 639 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 AMPD2Q01433 879 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 ZNF211Q13398 564 aaPredicted RBP16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 RPS6KA1Q15418 735 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 C10orf120Q5SQS8 335 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 TXNDC8Q6A555 127 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 STRADAQ7RTN6 431 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 GRASPQ7Z6J2 395 aaPredicted RBP16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 MIB1Q86YT6 1006 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 ELMOD1Q8N336 334 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 COG1Q8WTW3 980 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 HDAC7Q8WUI4 952 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 OVCA2Q8WZ82 227 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 SLC22A12Q96S37 553 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 CDCA3Q99618 268 aaPredicted RBP16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 PRKD2Q9BZL6 878 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 RNF38Q9H0F5 515 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 SMOC2Q9H3U7 446 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 WDR6Q9NNW5 1121 aaKnown RBP16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 ZDHHC7Q9NXF8 308 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 EHD2Q9NZN4 543 aa16.31■□□□□ 0.2
SFSWAP-206ENST00000537582 USP18Q9UMW8 372 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms