RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 FHL5Q5TD97 284 aa10.13□□□□□ -0.79
CPSF7-217ENST00000537162 MAMDC2Q7Z304 686 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-217ENST00000537162 TMC6Q7Z403 805 aa10.13□□□□□ -0.79
CPSF7-217ENST00000537162 NSUN7Q8NE18 718 aaKnown RBP10.13□□□□□ -0.79
CPSF7-217ENST00000537162 PKMYT1Q99640 499 aa10.13□□□□□ -0.79
CPSF7-217ENST00000537162 MRPL4Q9BYD3 311 aaKnown RBP10.13□□□□□ -0.79
CPSF7-217ENST00000537162 C22orf23Q9BZE7 217 aa10.13□□□□□ -0.79
CPSF7-217ENST00000537162 ZNF71Q9NQZ8 489 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-217ENST00000537162 TBC1D14Q9P2M4 693 aa10.13□□□□□ -0.79
CPSF7-217ENST00000537162 ENTPD2Q9Y5L3 495 aa10.13□□□□□ -0.79
CPSF7-217ENST00000537162 CCNT1O60563 726 aaKnown RBP10.12□□□□□ -0.79
CPSF7-217ENST00000537162 ABL1P00519 1130 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 THEGLP0DJG4 465 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 MBL2P11226 248 aaPredicted RBP10.12□□□□□ -0.79
CPSF7-217ENST00000537162 XRCC6P12956 609 aaKnown RBP eCLIP10.12□□□□□ -0.79
CPSF7-217ENST00000537162 TYRP14679 529 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 GSPT1P15170 499 aaKnown RBP10.12□□□□□ -0.79
CPSF7-217ENST00000537162 PDE6CP51160 858 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 MLLT10P55197 1068 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 DAB2P98082 770 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 KCNAB2Q13303 367 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 MORC3Q14149 939 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 PDIA5Q14554 519 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 PPP2R5AQ15172 486 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 NTRK3Q16288 839 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 SPATA1Q5VX52 437 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 CAPRIN2Q6IMN6 1127 aaKnown RBP10.12□□□□□ -0.79
CPSF7-217ENST00000537162 METTL23Q86XA0 190 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 SPATS2Q86XZ4 545 aaKnown RBP10.12□□□□□ -0.79
CPSF7-217ENST00000537162 SLC25A45Q8N413 288 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 SLC26A6Q9BXS9 759 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 GDF3Q9NR23 364 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 TRPM5Q9NZQ8 1165 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 RCAN3Q9UKA8 241 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 GTF3C4Q9UKN8 822 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 PCDHGA8Q9Y5G5 932 aa10.12□□□□□ -0.79
CPSF7-217ENST00000537162 LY6G6EA0A0G2JKS1 128 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 A0A1W2PPC4 97 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 YKT6O15498 198 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 LZTS3O60299 673 aaPredicted RBP10.11□□□□□ -0.79
CPSF7-217ENST00000537162 MED24O75448 989 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 RARGP13631 454 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 PFKLP17858 780 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 ACO1P21399 889 aaKnown RBP10.11□□□□□ -0.79
CPSF7-217ENST00000537162 TGM2P21980 687 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 RXRGP48443 463 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 ARRB1P49407 418 aaPredicted RBP10.11□□□□□ -0.79
CPSF7-217ENST00000537162 BCAT1P54687 386 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 POLE2P56282 527 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 NXPH1P58417 271 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 ZNF211Q13398 564 aaPredicted RBP10.11□□□□□ -0.79
CPSF7-217ENST00000537162 NOLC1Q14978 699 aaKnown RBP eCLIP10.11□□□□□ -0.79
CPSF7-217ENST00000537162 TPGS1Q6ZTW0 290 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 ATCAYQ86WG3 371 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 MMP21Q8N119 569 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 LEO1Q8WVC0 666 aaPredicted RBP10.11□□□□□ -0.79
CPSF7-217ENST00000537162 BHMTQ93088 406 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 OTUB2Q96DC9 234 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 LHX5Q9H2C1 402 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 ADNPQ9H2P0 1102 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 PLEKHA5Q9HAU0 1116 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 THAP10Q9P2Z0 257 aaPredicted RBP10.11□□□□□ -0.79
CPSF7-217ENST00000537162 DSEQ9UL01 958 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 U3KQA8 63 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 MTORP42345 2549 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 SDK2Q58EX2 2172 aa10.11□□□□□ -0.79
CPSF7-217ENST00000537162 NAV3Q8IVL0 2385 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 CCDC169A6NNP5 214 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 SYNCRIPO60506 623 aaKnown RBP10.1□□□□□ -0.79
CPSF7-217ENST00000537162 PRKCGP05129 697 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 HOXB4P17483 251 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-217ENST00000537162 CD38P28907 300 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 SLC5A2P31639 672 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 NPTX2P47972 431 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 DGKGP49619 791 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 ZNF234Q14588 700 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 ENOX2Q16206 610 aaKnown RBP10.1□□□□□ -0.79
CPSF7-217ENST00000537162 NFE2Q16621 373 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-217ENST00000537162 GEN1Q17RS7 908 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 EARS2Q5JPH6 523 aaKnown RBP10.1□□□□□ -0.79
CPSF7-217ENST00000537162 CREB3L3Q68CJ9 461 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 KIAA0895LQ68EN5 471 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 JADE1Q6IE81 842 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 RSRC2Q7L4I2 434 aaKnown RBP10.1□□□□□ -0.79
CPSF7-217ENST00000537162 NEK8Q86SG6 692 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 CATSPER3Q86XQ3 398 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 RUFY2Q8WXA3 655 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 SORCS1Q8WY21 1168 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 IFT74Q96LB3 600 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 AIFM3Q96NN9 605 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 BBS2Q9BXC9 721 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 BTBD1Q9H0C5 482 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 ABCB6Q9NP58 842 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 SH3GLB2Q9NR46 395 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 AASDHPPTQ9NRN7 309 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 UCKL1Q9NWZ5 548 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 PLK2Q9NYY3 685 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 SEL1LQ9UBV2 794 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 DAXXQ9UER7 740 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-217ENST00000537162 NIPBLQ6KC79 2804 aaeCLIP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms