RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 CNGB3Q9NQW8 809 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 TBC1D14Q9P2M4 693 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 TJP2Q9UDY2 1190 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 FBXO4Q9UKT5 387 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 MYO16Q9Y6X6 1858 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 FRYLO94915 3013 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 SLC12A8A0AV02 714 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 TRIM24O15164 1050 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 EPHB6O15197 1021 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 ZNF18P17022 549 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 DRD1P21728 446 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 HOXD11P31277 338 aaPredicted RBP13.79□□□□□ -0.2
PRKDC-206ENST00000536429 CLCN1P35523 988 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 RPL34P49207 117 aaKnown RBP13.79□□□□□ -0.2
PRKDC-206ENST00000536429 AMPD2Q01433 879 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 RAPGEF1Q13905 1077 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 DRAP1Q14919 205 aaPredicted RBP13.79□□□□□ -0.2
PRKDC-206ENST00000536429 ANO6Q4KMQ2 910 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 BTBD8Q5XKL5 378 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 MAMSTRQ6ZN01 415 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 RSRC2Q7L4I2 434 aaKnown RBP13.79□□□□□ -0.2
PRKDC-206ENST00000536429 ASCL5Q7RTU5 278 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 APTXQ7Z2E3 356 aaKnown RBP13.79□□□□□ -0.2
PRKDC-206ENST00000536429 SLC47A2Q86VL8 602 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 SCML4Q8N228 414 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 SPEM1Q8N4L4 309 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 WDTC1Q8N5D0 677 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 AOPEPQ8N6M6 819 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 NAT16Q8N8M0 369 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 HSFY1Q96LI6 401 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 FAM81BQ96LP2 452 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 NAA15Q9BXJ9 866 aaKnown RBP13.79□□□□□ -0.2
PRKDC-206ENST00000536429 SPHK2Q9NRA0 654 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 MARCH2Q9P0N8 246 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 SFMBT1Q9UHJ3 866 aa13.79□□□□□ -0.2
PRKDC-206ENST00000536429 FAM170AA1A519 330 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 PROB1E7EW31 1015 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 K7EQS6 105 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 K7ESF4 209 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 HOXC11O43248 304 aaPredicted RBP13.78□□□□□ -0.2
PRKDC-206ENST00000536429 MSI1O43347 362 aaKnown RBP13.78□□□□□ -0.2
PRKDC-206ENST00000536429 ADH1CP00326 375 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 FYNP06241 537 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 CHRM1P11229 460 aaPredicted RBP13.78□□□□□ -0.2
PRKDC-206ENST00000536429 ATP1A3P13637 1013 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 UCHL3P15374 230 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 CXCL12P48061 93 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 CCR3P51677 355 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 COPB1P53618 953 aaKnown RBP13.78□□□□□ -0.2
PRKDC-206ENST00000536429 KDSRQ06136 332 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 ZNF528Q3MIS6 628 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 TPGS1Q6ZTW0 290 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 TADA2BQ86TJ2 420 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 FMNL3Q8IVF7 1028 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 SCUBE3Q8IX30 993 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 ETFBKMTQ8IXQ9 262 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 FAM71AQ8IYT1 594 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 PHTF2Q8N3S3 785 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 SYNPOQ8N3V7 929 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 NELL1Q92832 810 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 OTUB2Q96DC9 234 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 PIWIL1Q96J94 861 aaKnown RBP13.78□□□□□ -0.2
PRKDC-206ENST00000536429 CDK5RAP1Q96SZ6 601 aaKnown RBP13.78□□□□□ -0.2
PRKDC-206ENST00000536429 IER2Q9BTL4 223 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 SLC4A5Q9BY07 1137 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 GANQ9H2C0 597 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 PLCB1Q9NQ66 1216 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 ST7Q9NRC1 585 aa13.78□□□□□ -0.2
PRKDC-206ENST00000536429 LSM7Q9UK45 103 aaKnown RBP13.78□□□□□ -0.2
PRKDC-206ENST00000536429 RIF1Q5UIP0 2472 aaKnown RBP13.78□□□□□ -0.2
PRKDC-206ENST00000536429 E5RJQ4 531 aa13.77□□□□□ -0.21
PRKDC-206ENST00000536429 PAPSS1O43252 624 aaPredicted RBP13.77□□□□□ -0.21
PRKDC-206ENST00000536429 MED7O43513 233 aa13.77□□□□□ -0.21
PRKDC-206ENST00000536429 CORO1AP31146 461 aaKnown RBP13.77□□□□□ -0.21
PRKDC-206ENST00000536429 SEC13P55735 322 aa13.77□□□□□ -0.21
PRKDC-206ENST00000536429 GAD2Q05329 585 aa13.77□□□□□ -0.21
PRKDC-206ENST00000536429 GOLGA8FQ08AF8 430 aa13.77□□□□□ -0.21
PRKDC-206ENST00000536429 GOLGA8DPQ0D2H9 430 aa13.77□□□□□ -0.21
PRKDC-206ENST00000536429 PDCLQ13371 301 aa13.77□□□□□ -0.21
PRKDC-206ENST00000536429 ANO4Q32M45 955 aa13.77□□□□□ -0.21
PRKDC-206ENST00000536429 DHX40Q8IX18 779 aaKnown RBP13.77□□□□□ -0.21
PRKDC-206ENST00000536429 RPLP0P6Q8NHW5 317 aa13.77□□□□□ -0.21
PRKDC-206ENST00000536429 IRGQQ8WZA9 623 aa13.77□□□□□ -0.21
PRKDC-206ENST00000536429 BHMTQ93088 406 aa13.77□□□□□ -0.21
PRKDC-206ENST00000536429 FUCA2Q9BTY2 467 aa13.77□□□□□ -0.21
PRKDC-206ENST00000536429 ZDHHC4Q9NPG8 344 aa13.77□□□□□ -0.21
PRKDC-206ENST00000536429 LIMA1Q9UHB6 759 aaKnown RBP13.77□□□□□ -0.21
PRKDC-206ENST00000536429 AGO1Q9UL18 857 aaKnown RBP13.77□□□□□ -0.21
PRKDC-206ENST00000536429 SIK3Q9Y2K2 1263 aa13.77□□□□□ -0.21
PRKDC-206ENST00000536429 CFAP54Q96N23 3096 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 PRR23AA6NEV1 266 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 LGALS16A8MUM7 142 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 NEDD8-MDP1E9PL57 170 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 TULP3O75386 442 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 FBXO21O94952 628 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 LTFP02788 710 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 PXNP49023 591 aaPredicted RBP13.76□□□□□ -0.21
PRKDC-206ENST00000536429 COG7P83436 770 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 PTK2Q05397 1052 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 TAF5Q15542 800 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms