RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 HTRA3P83110 453 aa22.26■■□□□ 1.15
TRIM3-214ENST00000536344 C1QBPQ07021 282 aaKnown RBP22.26■■□□□ 1.15
TRIM3-214ENST00000536344 KAZNQ674X7 775 aa22.26■■□□□ 1.15
TRIM3-214ENST00000536344 LPPQ93052 612 aa22.26■■□□□ 1.15
TRIM3-214ENST00000536344 SPATA16Q9BXB7 569 aa22.26■■□□□ 1.15
TRIM3-214ENST00000536344 C12orf65Q9H3J6 166 aaKnown RBP22.26■■□□□ 1.15
TRIM3-214ENST00000536344 TRAFD1O14545 582 aaPredicted RBP22.26■■□□□ 1.15
TRIM3-214ENST00000536344 PRKAR2AP13861 404 aaKnown RBP22.26■■□□□ 1.15
TRIM3-214ENST00000536344 RFC1P35251 1148 aaPredicted RBP22.26■■□□□ 1.15
TRIM3-214ENST00000536344 CAPN12Q6ZSI9 719 aa22.26■■□□□ 1.15
TRIM3-214ENST00000536344 TRIM11Q96F44 468 aa22.26■■□□□ 1.15
TRIM3-214ENST00000536344 TLE6Q9H808 572 aa22.26■■□□□ 1.15
TRIM3-214ENST00000536344 ETNK2Q9NVF9 386 aa22.26■■□□□ 1.15
TRIM3-214ENST00000536344 LNPEPQ9UIQ6 1025 aa22.26■■□□□ 1.15
TRIM3-214ENST00000536344 ITGA11Q9UKX5 1188 aa22.26■■□□□ 1.15
TRIM3-214ENST00000536344 CDY2AQ9Y6F7 541 aa22.26■■□□□ 1.15
TRIM3-214ENST00000536344 MYCP01106 439 aaPredicted RBP22.25■■□□□ 1.15
TRIM3-214ENST00000536344 IGHA2P01877 340 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 CYP1B1Q16678 543 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 UBXN11Q5T124 520 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 FAM182AQ5T1J6 154 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 ZNF513Q8N8E2 541 aaPredicted RBP22.25■■□□□ 1.15
TRIM3-214ENST00000536344 DPEP3Q9H4B8 488 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 MRPL47Q9HD33 250 aaKnown RBP22.25■■□□□ 1.15
TRIM3-214ENST00000536344 KANSL3Q9P2N6 904 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 IPPQ9Y573 584 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 SMIM28A0A1B0GU29 152 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 GSC2O15499 205 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 CDH16O75309 829 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 ERBB2P04626 1255 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 KRT10P13645 584 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 AMPD1P23109 780 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 PSMC1P62191 440 aaKnown RBP22.25■■□□□ 1.15
TRIM3-214ENST00000536344 SMTNL2Q2TAL5 461 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 RNF169Q8NCN4 708 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 RFWD2Q8NHY2 731 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 PIWIL1Q96J94 861 aaKnown RBP22.25■■□□□ 1.15
TRIM3-214ENST00000536344 XPNPEP3Q9NQH7 507 aa22.25■■□□□ 1.15
TRIM3-214ENST00000536344 SPTLC1O15269 473 aa22.24■■□□□ 1.15
TRIM3-214ENST00000536344 ASGR1P07306 291 aa22.24■■□□□ 1.15
TRIM3-214ENST00000536344 RARBP10826 455 aa22.24■■□□□ 1.15
TRIM3-214ENST00000536344 MAML1Q92585 1016 aa22.24■■□□□ 1.15
TRIM3-214ENST00000536344 DDX27Q96GQ7 796 aaKnown RBP22.24■■□□□ 1.15
TRIM3-214ENST00000536344 KATNAL1Q9BW62 490 aa22.24■■□□□ 1.15
TRIM3-214ENST00000536344 R3HDM2Q9Y2K5 976 aaKnown RBP22.24■■□□□ 1.15
TRIM3-214ENST00000536344 LAMA3Q16787 3333 aa22.24■■□□□ 1.15
TRIM3-214ENST00000536344 LMNAP02545 664 aaKnown RBP22.24■■□□□ 1.15
TRIM3-214ENST00000536344 RALAP11233 206 aa22.24■■□□□ 1.15
TRIM3-214ENST00000536344 KCNA10Q16322 511 aa22.24■■□□□ 1.15
TRIM3-214ENST00000536344 KCNT1Q5JUK3 1230 aa22.24■■□□□ 1.15
TRIM3-214ENST00000536344 OR6B3Q8NGW1 331 aa22.24■■□□□ 1.15
TRIM3-214ENST00000536344 ZNF184Q99676 751 aaPredicted RBP22.24■■□□□ 1.15
TRIM3-214ENST00000536344 TMEM191CA6NGB0 347 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 C2orf71A6NGG8 1288 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 COQ9O75208 318 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 PIAS1O75925 651 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 HSPA6P17066 643 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 THOC5Q13769 683 aaKnown RBP22.23■■□□□ 1.15
TRIM3-214ENST00000536344 PKN2Q16513 984 aaKnown RBP22.23■■□□□ 1.15
TRIM3-214ENST00000536344 RAB6CQ53S08 254 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 RINLQ6ZS11 566 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 SMG8Q8ND04 991 aaKnown RBP22.23■■□□□ 1.15
TRIM3-214ENST00000536344 DENND1AQ8TEH3 1009 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 RAB6CQ9H0N0 254 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 RHBDL2Q9NX52 303 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 EURLQ9NYK6 297 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 LGALS13Q9UHV8 139 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 MTUS1Q9ULD2 1270 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 POC1B-GALNT4F8VUJ3 575 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 USP46P62068 366 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 YWHAEP62258 255 aaKnown RBP22.23■■□□□ 1.15
TRIM3-214ENST00000536344 AP1B1Q10567 949 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 SGO2Q562F6 1265 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 PPP1R26Q5T8A7 1209 aaPredicted RBP22.23■■□□□ 1.15
TRIM3-214ENST00000536344 PLEKHG4BQ96PX9 1271 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 MTG1Q9BT17 334 aaPredicted RBP22.23■■□□□ 1.15
TRIM3-214ENST00000536344 FBXO6Q9NRD1 293 aaPredicted RBP22.23■■□□□ 1.15
TRIM3-214ENST00000536344 TSPAN16Q9UKR8 245 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 BARX2Q9UMQ3 279 aaPredicted RBP22.23■■□□□ 1.15
TRIM3-214ENST00000536344 SCINQ9Y6U3 715 aa22.23■■□□□ 1.15
TRIM3-214ENST00000536344 LMO2P25791 158 aa22.22■■□□□ 1.15
TRIM3-214ENST00000536344 GCAP28676 217 aa22.22■■□□□ 1.15
TRIM3-214ENST00000536344 CRYBB1P53674 252 aaPredicted RBP22.22■■□□□ 1.15
TRIM3-214ENST00000536344 SMC1BQ8NDV3 1235 aa22.22■■□□□ 1.15
TRIM3-214ENST00000536344 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.22■■□□□ 1.15
TRIM3-214ENST00000536344 SH3TC2Q8TF17 1288 aa22.22■■□□□ 1.15
TRIM3-214ENST00000536344 HAUS1Q96CS2 278 aa22.22■■□□□ 1.15
TRIM3-214ENST00000536344 MMADHCQ9H3L0 296 aaPredicted RBP22.22■■□□□ 1.15
TRIM3-214ENST00000536344 WHRNQ9P202 907 aa22.22■■□□□ 1.15
TRIM3-214ENST00000536344 ATXN10Q9UBB4 475 aa22.22■■□□□ 1.15
TRIM3-214ENST00000536344 GTF2IRD1Q9UHL9 959 aa22.22■■□□□ 1.15
TRIM3-214ENST00000536344 ST3GAL5Q9UNP4 418 aa22.22■■□□□ 1.15
TRIM3-214ENST00000536344 CALB1P05937 261 aa22.22■■□□□ 1.15
TRIM3-214ENST00000536344 P4HA1P13674 534 aa22.22■■□□□ 1.15
TRIM3-214ENST00000536344 ATF7P17544 494 aaPredicted RBP22.22■■□□□ 1.15
TRIM3-214ENST00000536344 ATICP31939 592 aa22.22■■□□□ 1.15
TRIM3-214ENST00000536344 CPA2P48052 419 aa22.22■■□□□ 1.15
TRIM3-214ENST00000536344 C9orf57Q5W0N0 161 aa22.22■■□□□ 1.15
TRIM3-214ENST00000536344 BTBD10Q9BSF8 475 aa22.22■■□□□ 1.15
TRIM3-214ENST00000536344 PCDHGC3Q9UN70 934 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms