RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 PALB2Q86YC2 1186 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 GPR135Q8IZ08 494 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 FGF13Q92913 245 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 DNAJC2Q99543 621 aaKnown RBP4.49□□□□□ -1.69
YBX3-205ENST00000536107 GTPBP2Q9BX10 602 aaKnown RBP4.49□□□□□ -1.69
YBX3-205ENST00000536107 CELF4Q9BZC1 486 aaKnown RBP4.49□□□□□ -1.69
YBX3-205ENST00000536107 ZDHHC5Q9C0B5 715 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 RBM12Q9NTZ6 932 aaKnown RBP4.49□□□□□ -1.69
YBX3-205ENST00000536107 SYNPO2Q9UMS6 1093 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 STX8Q9UNK0 236 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 SLC8A2Q9UPR5 921 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 SLC4A4Q9Y6R1 1079 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 PIAS3Q9Y6X2 628 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 IGSF9BQ9UPX0 1349 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 PLXNA4Q9HCM2 1894 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 IGKV6D-41A0A0C4DH26 115 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 BCLAF3A2AJT9 711 aaKnown RBP4.48□□□□□ -1.69
YBX3-205ENST00000536107 TRABD2BA6NFA1 517 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 AKAP3O75969 853 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 CPP00450 1065 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 URODP06132 367 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 SNRPB2P08579 225 aaKnown RBP4.48□□□□□ -1.69
YBX3-205ENST00000536107 FTH1P19P0C7X4 201 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 CHRNB1P11230 501 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 MYF5P13349 255 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 KRT10P13645 584 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 ZSCAN20P17040 1043 aaPredicted RBP4.48□□□□□ -1.69
YBX3-205ENST00000536107 CCNE1P24864 410 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 ADSSP30520 456 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 HOXC13P31276 330 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 CXADRP78310 365 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 IRX4P78413 519 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 SP2Q02086 613 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 MRPL58Q14197 206 aaKnown RBP4.48□□□□□ -1.69
YBX3-205ENST00000536107 TRIP6Q15654 476 aaKnown RBP4.48□□□□□ -1.69
YBX3-205ENST00000536107 PLK5Q496M5 336 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 VHLLQ6RSH7 139 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 Q6ZS52 159 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 GAREM2Q75VX8 874 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 TMEM173Q86WV6 379 aaPredicted RBP4.48□□□□□ -1.69
YBX3-205ENST00000536107 FMNL3Q8IVF7 1028 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 PPIL6Q8IXY8 311 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 BTN2A2Q8WVV5 523 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 ADAMTS14Q8WXS8 1223 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 PIGKQ92643 395 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 DNASE1L2Q92874 299 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 ZNF707Q96C28 371 aaPredicted RBP4.48□□□□□ -1.69
YBX3-205ENST00000536107 ZBTB10Q96DT7 871 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 IGSF21Q96ID5 467 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 ZC3H10Q96K80 434 aaKnown RBP4.48□□□□□ -1.69
YBX3-205ENST00000536107 CCDC140Q96MF4 163 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 NUSAP1Q9BXS6 441 aaKnown RBP4.48□□□□□ -1.69
YBX3-205ENST00000536107 MRPL9Q9BYD2 267 aaKnown RBP4.48□□□□□ -1.69
YBX3-205ENST00000536107 RHOBTB2Q9BYZ6 727 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 NT5C3AQ9H0P0 336 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 ELAC1Q9H777 363 aaKnown RBP4.48□□□□□ -1.69
YBX3-205ENST00000536107 NRDE2Q9H7Z3 1164 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 ARPP21Q9UBL0 812 aaPredicted RBP4.48□□□□□ -1.69
YBX3-205ENST00000536107 ST3GAL5Q9UNP4 418 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 APOBEC2Q9Y235 224 aaKnown RBP4.48□□□□□ -1.69
YBX3-205ENST00000536107 NOC2LQ9Y3T9 749 aaKnown RBP4.48□□□□□ -1.69
YBX3-205ENST00000536107 NUB1Q9Y5A7 615 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 PARP14Q460N5 1801 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 FBN2P35556 2912 aa4.48□□□□□ -1.69
YBX3-205ENST00000536107 PTPRCP08575 1304 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 C2CD3Q4AC94 2353 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 TTC3P53804 2025 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 PMS2P1A4D2B8 440 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 DCLK1O15075 740 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 TEX28O15482 410 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 PAPSS2O95340 614 aaPredicted RBP4.47□□□□□ -1.69
YBX3-205ENST00000536107 ITGAVP06756 1048 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 HSPD1P10809 573 aaKnown RBP4.47□□□□□ -1.69
YBX3-205ENST00000536107 HOXA6P31267 233 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 EIF2S3P41091 472 aaKnown RBP4.47□□□□□ -1.69
YBX3-205ENST00000536107 DHPSP49366 369 aaPredicted RBP4.47□□□□□ -1.69
YBX3-205ENST00000536107 KPNA1P52294 538 aaPredicted RBP4.47□□□□□ -1.69
YBX3-205ENST00000536107 NTHL1P78549 312 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 FAM189BP81408 668 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 TFAP4Q01664 338 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 SEMA3BQ13214 749 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 HNRNPDQ14103 355 aaKnown RBP4.47□□□□□ -1.69
YBX3-205ENST00000536107 MAPK6Q16659 721 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 TRIM61Q5EBN2 209 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 PIP4P1Q86T03 277 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 MCF2L2Q86YR7 1114 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 TBC1D5Q92609 795 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 HAS1Q92839 578 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 MCRS1Q96EZ8 462 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 TRMT61BQ9BVS5 477 aaKnown RBP4.47□□□□□ -1.69
YBX3-205ENST00000536107 PLEKHA4Q9H4M7 779 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 C2orf42Q9NWW7 574 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 ZDHHC7Q9NXF8 308 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 DKK4Q9UBT3 224 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 STK39Q9UEW8 545 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 PCDHA1Q9Y5I3 950 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 RELNP78509 3460 aa4.47□□□□□ -1.69
YBX3-205ENST00000536107 URB1O60287 2271 aaKnown RBP4.47□□□□□ -1.69
YBX3-205ENST00000536107 SDK1Q7Z5N4 2213 aa4.46□□□□□ -1.69
YBX3-205ENST00000536107 PTPRQQ9UMZ3 2332 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms