RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 KRT72Q14CN4 511 aa16.63■□□□□ 0.25
CHMP1A-202ENST00000535997 CA9Q16790 459 aa16.63■□□□□ 0.25
CHMP1A-202ENST00000535997 ARMCX2Q7L311 632 aa16.63■□□□□ 0.25
CHMP1A-202ENST00000535997 CDKL3Q8IVW4 592 aaPredicted RBP16.63■□□□□ 0.25
CHMP1A-202ENST00000535997 PTCD3Q96EY7 689 aaKnown RBP16.63■□□□□ 0.25
CHMP1A-202ENST00000535997 CLMNQ96JQ2 1002 aa16.63■□□□□ 0.25
CHMP1A-202ENST00000535997 ZNF570Q96NI8 536 aa16.63■□□□□ 0.25
CHMP1A-202ENST00000535997 DENND2DQ9H6A0 471 aaPredicted RBP16.63■□□□□ 0.25
CHMP1A-202ENST00000535997 HESX1Q9UBX0 185 aa16.63■□□□□ 0.25
CHMP1A-202ENST00000535997 LRRC42Q9Y546 428 aa16.63■□□□□ 0.25
CHMP1A-202ENST00000535997 CXorf49A8MYA2 514 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 PAPSS1O43252 624 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 SERPINB3P29508 390 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 PPP6R3Q5H9R7 873 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 MTHFD1LQ6UB35 978 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 CDHR3Q6ZTQ4 885 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 FASTKD5Q7L8L6 764 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 ACOT1Q86TX2 421 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 VPS52Q8N1B4 723 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 CFAP61Q8NHU2 1237 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 PPTC7Q8NI37 304 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 CCDC110Q8TBZ0 833 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 MIEF2Q96C03 454 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 DCLRE1BQ9H816 532 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 PLAC1Q9HBJ0 212 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 MKS1Q9NXB0 559 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 DERAQ9Y315 318 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 KAT6AQ92794 2004 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 ADM5C9JUS6 153 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 RFPL1O75677 317 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 PTPN9P43378 593 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 DPYSL2Q16555 572 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 FAXCQ5TGI0 409 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 FAM91A1Q658Y4 838 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 ATG16L1Q676U5 607 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 TAPT1Q6NXT6 567 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 C4orf50Q6ZRC1 276 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 CYS1Q717R9 158 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 ARCQ7LC44 396 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 SHCBP1Q8NEM2 672 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 CENPIQ92674 756 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 SIGLEC10Q96LC7 697 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 MRPL45Q9BRJ2 306 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 CADM1Q9BY67 442 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 ADARB2Q9NS39 739 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 ARL8BQ9NVJ2 186 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 SNX9Q9Y5X1 595 aa16.62■□□□□ 0.25
CHMP1A-202ENST00000535997 ZSWIM8A7E2V4 1837 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 GSC2O15499 205 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 TPSB2P20231 275 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 CYP2F1P24903 491 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 L1CAMP32004 1257 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 PPIL2Q13356 520 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 NAA25Q14CX7 972 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 TPSAB1Q15661 275 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 UNC5AQ6ZN44 842 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 UNC93AQ86WB7 457 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 GSDMBQ8TAX9 411 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 C7orf26Q96N11 449 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 MIPEPQ99797 713 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 EBNA1BP2Q99848 306 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 GTF2IRD1Q9UHL9 959 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 PAPPA2Q9BXP8 1791 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 OTOFQ9HC10 1997 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 A6NJR5 290 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 I3L4J1 428 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 CCNFP41002 786 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 DCAF4L1Q3SXM0 396 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.61■□□□□ 0.255e-6■■□□□ 13.3
CHMP1A-202ENST00000535997 EMID1Q96A84 441 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 OXNAD1Q96HP4 312 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 C16orf70Q9BSU1 422 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 C11orf84Q9BUA3 381 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 XAB2Q9HCS7 855 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 KCNK4Q9NYG8 393 aa16.61■□□□□ 0.25
CHMP1A-202ENST00000535997 FAM159BA6NKW6 160 aa16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 GYG2O15488 501 aa16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 ENTPD5O75356 428 aa16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 GABBR2O75899 941 aa16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 MAP3K6O95382 1288 aa16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 MYL2P10916 166 aa16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 MRPS5P82675 430 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 GJC2Q5T442 439 aaPredicted RBP16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 ARHGAP17Q68EM7 881 aa16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 BZW1Q7L1Q6 419 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 ZNF410Q86VK4 478 aa16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 RAB3IL1Q8TBN0 382 aa16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 E2F7Q96AV8 911 aa16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 B3GNT5Q9BYG0 378 aa16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 FBXO6Q9NRD1 293 aaPredicted RBP16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 SMYD2Q9NRG4 433 aa16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 FAM49BQ9NUQ9 324 aa16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 SIRPGQ9P1W8 387 aa16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 SCN1AP35498 2009 aa16.6■□□□□ 0.25
CHMP1A-202ENST00000535997 H3BRB1 525 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 METTL18O95568 372 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 CRHR1P34998 444 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 SCNN1AP37088 669 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 SERPINB9P50453 376 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 CDK18Q07002 472 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms