RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 IL37Q9NZH6 218 aa13.68□□□□□ -0.22
TNFRSF1A-207ENST00000535958 MARK1Q9P0L2 795 aa13.68□□□□□ -0.22
TNFRSF1A-207ENST00000535958 LHX6Q9UPM6 363 aa13.68□□□□□ -0.22
TNFRSF1A-207ENST00000535958 FRMD4BQ9Y2L6 1034 aa13.68□□□□□ -0.22
TNFRSF1A-207ENST00000535958 PCDHA5Q9Y5H7 936 aa13.68□□□□□ -0.22
TNFRSF1A-207ENST00000535958 RAD54BQ9Y620 910 aa13.68□□□□□ -0.22
TNFRSF1A-207ENST00000535958 MYO18AQ92614 2054 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-207ENST00000535958 GON4LQ3T8J9 2241 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 GFRA2O00451 464 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 CYP26A1O43174 497 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 SYNCRIPO60506 623 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 KIF20AO95235 890 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 TBX18O95935 607 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 RARGP13631 454 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 ACO1P21399 889 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 CASP1P29466 404 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 PLA2G4AP47712 749 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 ME1P48163 572 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 SLC14A1Q13336 389 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 SHC4Q6S5L8 630 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 MIB1Q86YT6 1006 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 SLC41A1Q8IVJ1 513 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 CHCHD4Q8N4Q1 142 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 OR2I1PQ8NGU4 316 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 WBP2Q969T9 261 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 CDK5RAP1Q96SZ6 601 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 ACOX2Q99424 681 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 GABRG3Q99928 467 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 KLF16Q9BXK1 252 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 SDCBP2Q9H190 292 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 CYLDQ9NQC7 956 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 DNAAF2Q9NVR5 837 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 DNMT3LQ9UJW3 386 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 NAGPAQ9UK23 515 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 SCML2Q9UQR0 700 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 ZNF510Q9Y2H8 683 aa13.67□□□□□ -0.22
TNFRSF1A-207ENST00000535958 PRRT4C9JH25 899 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 K7ELQ4 463 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 BEST1O76090 585 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 C4BPAP04003 597 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 RALAP11233 206 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 ACADMP11310 421 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 CD6P30203 668 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 PSEN1P49768 467 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 ARID5AQ03989 594 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 EHHADHQ08426 723 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 CUL4BQ13620 913 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 COL9A2Q14055 689 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 TRIP6Q15654 476 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 FOXD4L5Q5VV16 416 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 CEP135Q66GS9 1140 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 TOGARAM2Q6ZUX3 1019 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 NAXDQ8IW45 347 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 C12orf29Q8N999 325 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 ZMIZ2Q8NF64 920 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 FOXD4L4Q8WXT5 416 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 ELMO3Q96BJ8 720 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 MRGPRX1Q96LB2 322 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 ZDHHC5Q9C0B5 715 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 GZF1Q9H116 711 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 MIR1-1HGQ9H1L0 117 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 PRDM16Q9HAZ2 1276 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 CSNK1G1Q9HCP0 422 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 PLK2Q9NYY3 685 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 HMGXB4Q9UGU5 601 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 RASAL2Q9UJF2 1139 aa13.66□□□□□ -0.22
TNFRSF1A-207ENST00000535958 PCDH15Q96QU1 1955 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 A0A1B0GTW7 788 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 A0A1W2PQH9 124 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 NPC1O15118 1278 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 VNN1O95497 513 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 CYBBP04839 570 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 HSP90AA1P07900 732 aaKnown RBP13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 CHKAP35790 457 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 FOXD4L6Q3SYB3 417 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 KLHDC10Q6PID8 442 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 FOXD4L3Q6VB84 417 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 CLEC20AQ6ZU45 233 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 CRYBG2Q8N1P7 616 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 PLEKHO2Q8TD55 490 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 CYFIP2Q96F07 1278 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 NT5C1AQ9BXI3 368 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 DCLK3Q9C098 648 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 SLC6A17Q9H1V8 727 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 PNPLA8Q9NP80 782 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 APOBEC2Q9Y235 224 aaKnown RBP13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 STON1Q9Y6Q2 735 aa13.65□□□□□ -0.22
TNFRSF1A-207ENST00000535958 CACNA1EQ15878 2313 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 MDM4O15151 490 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CALUO43852 315 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SH3BP5O60239 455 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CER1O95813 267 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ASS1P00966 412 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 NR3C1P04150 777 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 FTH1P19P0C7X4 201 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 NCAM1P13591 858 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CD59P13987 128 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CD58P19256 250 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 OXTRP30559 389 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms