RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 EGFL6Q8IUX8 553 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 CCNYL1Q8N7R7 359 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 EPAS1Q99814 870 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 GRIP2Q9C0E4 1043 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 KCNK13Q9HB14 408 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 USP12O75317 370 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 LYPLA2O95372 231 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 APOEP02649 317 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 GPD1P21695 349 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 PPM1JQ5JR12 505 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 OR52E8Q6IFG1 317 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 B3GNT9Q6UX72 402 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 NET1Q7Z628 596 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-232ENST00000535094 DHDDSQ86SQ9 333 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 RELL1Q8IUW5 271 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 OPTNQ96CV9 577 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 ADA2Q9NZK5 511 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 ARHGAP28Q9P2N2 729 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 HESX1Q9UBX0 185 aa16.45■□□□□ 0.22
MCF2L-232ENST00000535094 GOLGA8TH3BQL2 631 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 TRAFD1O14545 582 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-232ENST00000535094 XPO1O14980 1071 aaKnown RBP16.44■□□□□ 0.22
MCF2L-232ENST00000535094 ITM2AO43736 263 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 RNASEH1O60930 286 aaKnown RBP16.44■□□□□ 0.22
MCF2L-232ENST00000535094 ASS1P00966 412 aaKnown RBP16.44■□□□□ 0.22
MCF2L-232ENST00000535094 ERBB2P04626 1255 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 SOX11P35716 441 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 PHKA2P46019 1235 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 MRPS22P82650 360 aaKnown RBP16.44■□□□□ 0.22
MCF2L-232ENST00000535094 PDPK2PQ6A1A2 396 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 RSBN1LQ6PCB5 846 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-232ENST00000535094 MARK2Q7KZI7 788 aaKnown RBP16.44■□□□□ 0.22
MCF2L-232ENST00000535094 PTAR1Q7Z6K3 402 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-232ENST00000535094 VSIG10LQ86VR7 867 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 SCUBE3Q8IX30 993 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 CDHR1Q96JP9 859 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 FERMT1Q9BQL6 677 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 HBS1LQ9Y450 684 aaKnown RBP16.44■□□□□ 0.22
MCF2L-232ENST00000535094 SMAPO00193 183 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 MLH1P40692 756 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 YWHAZP63104 245 aaKnown RBP16.44■□□□□ 0.22
MCF2L-232ENST00000535094 CNTN2Q02246 1040 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 PDCD2Q16342 344 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-232ENST00000535094 FAM43BQ6ZT52 329 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-232ENST00000535094 KIAA0319LQ8IZA0 1049 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 MPP5Q8N3R9 675 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 FAM172AQ8WUF8 416 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 AKT1S1Q96B36 256 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 MARK4Q96L34 752 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 TRAPPC9Q96Q05 1148 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 APOL2Q9BQE5 337 aa16.44■□□□□ 0.22
MCF2L-232ENST00000535094 SIGLEC16A6NMB1 481 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 YDJCA8MPS7 323 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 LSM8O95777 96 aaKnown RBP16.43■□□□□ 0.22
MCF2L-232ENST00000535094 STXBP2Q15833 593 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 DPY19L2Q6NUT2 758 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 TRIML2Q8N7C3 387 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 ADAM32Q8TC27 787 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 PIWIL2Q8TC59 973 aaKnown RBP16.43■□□□□ 0.22
MCF2L-232ENST00000535094 Q9H521 79 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 SLC38A10Q9HBR0 1119 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 THAP1Q9NVV9 213 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 RPL26L1Q9UNX3 145 aaKnown RBP16.43■□□□□ 0.22
MCF2L-232ENST00000535094 PMM2O15305 246 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 SUPT20HL2P0C7V6 817 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 PTGER2P43116 358 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 GLRBP48167 497 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 DLG1Q12959 904 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 KRT72Q14CN4 511 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 SUPT20HL1Q3ZLR7 823 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 SPDYAQ5MJ70 313 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 MTHFD1LQ6UB35 978 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 UNC5AQ6ZN44 842 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 HAPLN2Q9GZV7 340 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 ZNF358Q9NW07 568 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 MYOCOSA0A1B0GUC4 107 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 HNRNPRO43390 633 aaKnown RBP16.43■□□□□ 0.22
MCF2L-232ENST00000535094 KLHL2O95198 593 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 LCP1P13796 627 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 NAMPTP43490 491 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 ACAP1Q15027 740 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 CMC1Q7Z7K0 106 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 C12orf29Q8N999 325 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 MOCOSQ96EN8 888 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 PRPF18Q99633 342 aaKnown RBP16.43■□□□□ 0.22
MCF2L-232ENST00000535094 FARP1Q9Y4F1 1045 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-232ENST00000535094 MRPL42Q9Y6G3 142 aaKnown RBP16.43■□□□□ 0.22
MCF2L-232ENST00000535094 CNTNAP2Q9UHC6 1331 aa16.43■□□□□ 0.22
MCF2L-232ENST00000535094 ABLIM1O14639 778 aa16.42■□□□□ 0.22
MCF2L-232ENST00000535094 TPP1O14773 563 aa16.42■□□□□ 0.22
MCF2L-232ENST00000535094 SPAG6O75602 509 aa16.42■□□□□ 0.22
MCF2L-232ENST00000535094 CLPTM1O96005 669 aa16.42■□□□□ 0.22
MCF2L-232ENST00000535094 TGFB2P61812 414 aa16.42■□□□□ 0.22
MCF2L-232ENST00000535094 PTPN11Q06124 597 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-232ENST00000535094 PDK3Q15120 406 aa16.42■□□□□ 0.22
MCF2L-232ENST00000535094 NIPA1Q7RTP0 329 aa16.42■□□□□ 0.22
MCF2L-232ENST00000535094 PHF12Q96QT6 1004 aa16.42■□□□□ 0.22
MCF2L-232ENST00000535094 FAF1Q9UNN5 650 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-232ENST00000535094 MYH9P35579 1960 aaKnown RBP16.42■□□□□ 0.22
MCF2L-232ENST00000535094 FKBP6O75344 327 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms