RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 SYPL2Q5VXT5 272 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 LRSAM1Q6UWE0 723 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 PHLDB2Q86SQ0 1253 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 TMEM110Q86TL2 294 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 TMEM25Q86YD3 366 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 PRSS33Q8NF86 280 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 ADAM32Q8TC27 787 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 EPS8L1Q8TE68 723 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 STK32AQ8WU08 396 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 RNF139Q8WU17 664 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 FAM149B1Q96BN6 582 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 P2RY11Q96G91 374 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 PPP1R13BQ96KQ4 1090 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 LHX5Q9H2C1 402 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 C8orf33Q9H7E9 229 aaPredicted RBP14.02□□□□□ -0.17
CMTM1-219ENST00000533953 LMAN1LQ9HAT1 526 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 NOCTQ9UK39 431 aaKnown RBP14.02□□□□□ -0.17
CMTM1-219ENST00000533953 F5P12259 2224 aa14.02□□□□□ -0.17
CMTM1-219ENST00000533953 MAN2B1O00754 1011 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 LTFP02788 710 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 HOXC13P31276 330 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 ACADSBP45954 432 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 PITX1P78337 314 aaPredicted RBP14.01□□□□□ -0.17
CMTM1-219ENST00000533953 OR6B2Q6IFH4 312 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 KLHDC10Q6PID8 442 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 HTR3DQ70Z44 454 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 C12orf40Q86WS4 652 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 RALGPS2Q86X27 583 aaPredicted RBP14.01□□□□□ -0.17
CMTM1-219ENST00000533953 DDX42Q86XP3 938 aaKnown RBP eCLIP14.01□□□□□ -0.17
CMTM1-219ENST00000533953 FMNL3Q8IVF7 1028 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 SFTPA1Q8IWL2 248 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 SCML4Q8N228 414 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 CPA6Q8N4T0 437 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 NAT16Q8N8M0 369 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 DTWD2Q8NBA8 298 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 CPA5Q8WXQ8 436 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 ATP2A3Q93084 1043 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 BHMTQ93088 406 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 PCDHB18PQ96TA0 734 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 ABCC13Q9NSE7 274 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 POLR3BQ9NW08 1133 aaPredicted RBP14.01□□□□□ -0.17
CMTM1-219ENST00000533953 IFNKQ9P0W0 207 aa14.01□□□□□ -0.17
CMTM1-219ENST00000533953 NUP210Q8TEM1 1887 aaPredicted RBP14.01□□□□□ -0.17
CMTM1-219ENST00000533953 TICRRQ7Z2Z1 1910 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 PATJQ8NI35 1801 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 TRDMT1O14717 391 aaKnown RBP14□□□□□ -0.17
CMTM1-219ENST00000533953 TRIM24O15164 1050 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 FBXO21O94952 628 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 EGFP01133 1207 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 CHRNB1P11230 501 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 NCAM1P13591 858 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 CORO1AP31146 461 aaKnown RBP14□□□□□ -0.17
CMTM1-219ENST00000533953 UBASH3AP57075 661 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 TPM4P67936 248 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 FMO1Q01740 532 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 GAS6Q14393 721 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 MEA1Q16626 185 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 NAA35Q5VZE5 725 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 FSTL4Q6MZW2 842 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 Q6ZS52 159 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 TPGS1Q6ZTW0 290 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 FAM183BPQ6ZVS7 135 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 CACNA2D4Q7Z3S7 1137 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 DENND1CQ8IV53 801 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 ZNF276Q8N554 614 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 IRGQQ8WZA9 623 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 BAP1Q92560 729 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 EZH1Q92800 747 aaPredicted RBP14□□□□□ -0.17
CMTM1-219ENST00000533953 STRIP2Q9ULQ0 834 aa14□□□□□ -0.17
CMTM1-219ENST00000533953 MRPS17Q9Y2R5 130 aaKnown RBP14□□□□□ -0.17
CMTM1-219ENST00000533953 COL4A2P08572 1712 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 H0Y858 1186 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 SLC9A3R1O14745 358 aaPredicted RBP13.99□□□□□ -0.17
CMTM1-219ENST00000533953 NFATC1O95644 943 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 OPRD1P41143 372 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 COG7P83436 770 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 E4F1Q66K89 784 aaPredicted RBP13.99□□□□□ -0.17
CMTM1-219ENST00000533953 PKN3Q6P5Z2 889 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 Q6ZNB5 142 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 TADA2BQ86TJ2 420 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 TMEM35BQ8NCS4 154 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 SLC30A5Q8TAD4 765 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 CPLX3Q8WVH0 158 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 CLDN23Q96B33 292 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 CDK5RAP1Q96SZ6 601 aaKnown RBP13.99□□□□□ -0.17
CMTM1-219ENST00000533953 NELL2Q99435 816 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 SYNCQ9H7C4 482 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 C2orf42Q9NWW7 574 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 PLK2Q9NYY3 685 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 TBC1D14Q9P2M4 693 aa13.99□□□□□ -0.17
CMTM1-219ENST00000533953 AGO1Q9UL18 857 aaKnown RBP13.99□□□□□ -0.17
CMTM1-219ENST00000533953 GOLGA6L7A0A1B0GV03 622 aa13.98□□□□□ -0.17
CMTM1-219ENST00000533953 LRRC53A6NM62 1247 aa13.98□□□□□ -0.17
CMTM1-219ENST00000533953 GOLGA8SH3BPF8 625 aa13.98□□□□□ -0.17
CMTM1-219ENST00000533953 GALR2O43603 387 aaPredicted RBP13.98□□□□□ -0.17
CMTM1-219ENST00000533953 TSPAN3O60637 253 aa13.98□□□□□ -0.17
CMTM1-219ENST00000533953 CAVIN2O95810 425 aa13.98□□□□□ -0.17
CMTM1-219ENST00000533953 ADH5P11766 374 aa13.98□□□□□ -0.17
CMTM1-219ENST00000533953 MLLT6P55198 1093 aaPredicted RBP13.98□□□□□ -0.17
CMTM1-219ENST00000533953 RNASE9P60153 205 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms