RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 ATP11AP98196 1134 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 ADCY1Q08828 1119 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 NAB1Q13506 487 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 SLC1A5Q15758 541 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 KIZQ2M2Z5 673 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 HP1BP3Q5SSJ5 553 aaPredicted RBP12.42□□□□□ -0.42
ATM-222ENST00000533733 C1orf228Q6PIY5 440 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 CCDC91Q7Z6B0 441 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 LRRC6Q86X45 466 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 ECHDC2Q86YB7 292 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 AGGF1Q8N302 714 aaeCLIP12.42□□□□□ -0.42
ATM-222ENST00000533733 APPL2Q8NEU8 664 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 RAB3IL1Q8TBN0 382 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 QKIQ96PU8 341 aaKnown RBP eCLIP12.42□□□□□ -0.42
ATM-222ENST00000533733 PPP1R16BQ96T49 567 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 WDR83Q9BRX9 315 aaKnown RBP12.42□□□□□ -0.42
ATM-222ENST00000533733 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.42□□□□□ -0.42
ATM-222ENST00000533733 Q9Y3F1 56 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 RAD54BQ9Y620 910 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 GLTPD2A6NH11 291 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 FOXO6A8MYZ6 492 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 PPP1R12AO14974 1030 aaPredicted RBP12.41□□□□□ -0.42
ATM-222ENST00000533733 RECQL4O94761 1208 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 STK10O94804 968 aaKnown RBP12.41□□□□□ -0.42
ATM-222ENST00000533733 ITGBL1O95965 494 aaPredicted RBP12.41□□□□□ -0.42
ATM-222ENST00000533733 SMIM10L2AP0DMW4 78 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 SMIM10L2BP0DMW5 78 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 GNAT1P11488 350 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 WARSP23381 471 aaKnown RBP12.41□□□□□ -0.42
ATM-222ENST00000533733 RBL1P28749 1068 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 L1CAMP32004 1257 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 ARL4AP40617 200 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 MAGEA3P43357 314 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 NEK3P51956 506 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 YWHAZP63104 245 aaKnown RBP12.41□□□□□ -0.42
ATM-222ENST00000533733 CDK18Q07002 472 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 SOWAHAQ2M3V2 549 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 WLSQ5T9L3 541 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 SH3PXD2AQ5TCZ1 1133 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 NPNTQ6UXI9 565 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 FAM47EQ6ZV65 393 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 TBC1D1Q86TI0 1168 aaPredicted RBP12.41□□□□□ -0.42
ATM-222ENST00000533733 TCP10LQ8TDR4 215 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 C10orf82Q8WW14 230 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 RMDN2Q96LZ7 410 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 ZMAT2Q96NC0 199 aaKnown RBP12.41□□□□□ -0.42
ATM-222ENST00000533733 NAT9Q9BTE0 207 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 IQCGQ9H095 443 aaKnown RBP12.41□□□□□ -0.42
ATM-222ENST00000533733 MANSC1Q9H8J5 431 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 KIF9Q9HAQ2 790 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 EIF2B3Q9NR50 452 aaKnown RBP12.41□□□□□ -0.42
ATM-222ENST00000533733 SETD4Q9NVD3 440 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 ZC3H7BQ9UGR2 993 aaKnown RBP12.41□□□□□ -0.42
ATM-222ENST00000533733 AP4E1Q9UPM8 1137 aa12.41□□□□□ -0.42
ATM-222ENST00000533733 HUS1O60921 280 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 BANF1O75531 89 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 DAB1O75553 588 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 APOEP02649 317 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 CCND1P24385 295 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 CPT1AP50416 773 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 ZNF135P52742 658 aaPredicted RBP12.4□□□□□ -0.42
ATM-222ENST00000533733 SEMA5AQ13591 1074 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 KBTBD12Q3ZCT8 623 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 PREPLQ4J6C6 727 aaPredicted RBP12.4□□□□□ -0.42
ATM-222ENST00000533733 HEATR6Q6AI08 1181 aaKnown RBP12.4□□□□□ -0.42
ATM-222ENST00000533733 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 ZNF449Q6P9G9 518 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 SCUBE3Q8IX30 993 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 CFAP61Q8NHU2 1237 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 GSDMBQ8TAX9 411 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 KCTD13Q8WZ19 329 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 PIWIL1Q96J94 861 aaKnown RBP12.4□□□□□ -0.42
ATM-222ENST00000533733 TRIM55Q9BYV6 548 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 LRMDAQ9H2I8 198 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 POPDC2Q9HBU9 364 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 NOD2Q9HC29 1040 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 FAM49BQ9NUQ9 324 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 TUBGCP4Q9UGJ1 667 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 STAP1Q9ULZ2 295 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 HEY1Q9Y5J3 304 aa12.4□□□□□ -0.42
ATM-222ENST00000533733 HAS3O00219 553 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 IGF2BP3O00425 579 aaKnown RBP eCLIP12.4□□□□□ -0.43
ATM-222ENST00000533733 TRAFD1O14545 582 aaPredicted RBP12.4□□□□□ -0.43
ATM-222ENST00000533733 COPEO14579 308 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 GRAP2O75791 330 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 RPLP2P05387 115 aaKnown RBP12.4□□□□□ -0.43
ATM-222ENST00000533733 LRPAP1P30533 357 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 CCNFP41002 786 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 MATKP42679 507 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 CRYBB1P53674 252 aaPredicted RBP12.4□□□□□ -0.43
ATM-222ENST00000533733 ADAM17P78536 824 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 GAD2Q05329 585 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 MGAT5Q09328 741 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 SLC25A52Q3SY17 297 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 STXBP5Q5T5C0 1151 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 PDZD4Q76G19 769 aaPredicted RBP12.4□□□□□ -0.43
ATM-222ENST00000533733 OTOAQ7RTW8 1153 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 BRI3BPQ8WY22 251 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 SLC9A7Q96T83 725 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 HNRNPABQ99729 332 aaKnown RBP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms