RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 ALLCQ8N6M5 410 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 IL17RCQ8NAC3 791 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 TXNDC5Q8NBS9 432 aaKnown RBP9.21□□□□□ -0.94
COPB1-210ENST00000533533 MYCBPAPQ8TBZ2 947 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 WHAMMQ8TF30 809 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 RLN3Q8WXF3 142 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 SEMA4DQ92854 862 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 SLC35C1Q96A29 364 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 PCED1BQ96HM7 432 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 MED10Q9BTT4 135 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 TMEM121BQ9BXQ6 578 aaPredicted RBP9.21□□□□□ -0.94
COPB1-210ENST00000533533 ADAM33Q9BZ11 813 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 NIF3L1Q9GZT8 377 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 RNF38Q9H0F5 515 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 SDCBP2Q9H190 292 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 DPEP3Q9H4B8 488 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 ANO10Q9NW15 660 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 EHD2Q9NZN4 543 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 TMEM63CQ9P1W3 806 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 EVLQ9UI08 416 aaPredicted RBP9.21□□□□□ -0.94
COPB1-210ENST00000533533 LAMA5O15230 3695 aa9.21□□□□□ -0.94
COPB1-210ENST00000533533 A0A0A0MRY4 1105 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 TMEM8BA6NDV4 472 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 F8VP50 259 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 SGK1O00141 431 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 TNFRSF10BO14763 440 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 KAT7O95251 611 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 KLF8O95600 359 aaPredicted RBP9.2□□□□□ -0.94
COPB1-210ENST00000533533 OLFM2O95897 454 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 ADH1CP00326 375 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 OAS1P00973 400 aaKnown RBP9.2□□□□□ -0.94
COPB1-210ENST00000533533 AFPP02771 609 aaKnown RBP9.2□□□□□ -0.94
COPB1-210ENST00000533533 APODP05090 189 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 PTPN1P18031 435 aaKnown RBP9.2□□□□□ -0.94
COPB1-210ENST00000533533 ERCC5P28715 1186 aaPredicted RBP9.2□□□□□ -0.94
COPB1-210ENST00000533533 EIF2DP41214 584 aaKnown RBP9.2□□□□□ -0.94
COPB1-210ENST00000533533 GRIA2P42262 883 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 PTGER3P43115 390 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 KIR2DL1P43626 348 aaPredicted RBP9.2□□□□□ -0.94
COPB1-210ENST00000533533 SLC6A11P48066 632 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 NDST1P52848 882 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 KCNH2Q12809 1159 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 STX1AQ16623 288 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 ZNF394Q53GI3 561 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 RHBDF2Q6PJF5 856 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 FOXR2Q6PJQ5 311 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 ACOT1Q86TX2 421 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 C12orf40Q86WS4 652 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 SYT12Q8IV01 421 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 FAM114A1Q8IWE2 563 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 DEFB124Q8NES8 71 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 GATA6Q92908 595 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 TNIP3Q96KP6 325 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 SPACA7Q96KW9 195 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 C8orf48Q96LL4 319 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 PNKPQ96T60 521 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 SCNM1Q9BWG6 230 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 NUSAP1Q9BXS6 441 aaKnown RBP9.2□□□□□ -0.94
COPB1-210ENST00000533533 DNAI2Q9GZS0 605 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 VRTNQ9H8Y1 702 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 APOBEC3GQ9HC16 384 aaKnown RBP9.2□□□□□ -0.94
COPB1-210ENST00000533533 POLMQ9NP87 494 aaPredicted RBP9.2□□□□□ -0.94
COPB1-210ENST00000533533 SMPD4Q9NXE4 827 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 CFAP97Q9P2B7 532 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 CPQQ9Y646 472 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 IGSF10Q6WRI0 2623 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 URB1O60287 2271 aaKnown RBP9.2□□□□□ -0.94
COPB1-210ENST00000533533 CELSR3Q9NYQ7 3312 aa9.2□□□□□ -0.94
COPB1-210ENST00000533533 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 SCAMP3O14828 347 aaKnown RBP9.19□□□□□ -0.94
COPB1-210ENST00000533533 ADAM23O75077 832 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 ABL1P00519 1130 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 FAM163BP0C2L3 166 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 ADH5P11766 374 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 PRKCSHP14314 528 aaPredicted RBP9.19□□□□□ -0.94
COPB1-210ENST00000533533 DPP6P42658 865 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 TNFRSF4P43489 277 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 ASPAP45381 313 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 IFRD2Q12894 506 aaPredicted RBP9.19□□□□□ -0.94
COPB1-210ENST00000533533 TAF10Q12962 218 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 BYSLQ13895 437 aaKnown RBP9.19□□□□□ -0.94
COPB1-210ENST00000533533 MAP7D1Q3KQU3 841 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 SPDYCQ5MJ68 293 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 EOGTQ5NDL2 527 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 EMC10Q5UCC4 262 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 SLC23A3Q6PIS1 610 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 RBM43Q6ZSC3 357 aaKnown RBP9.19□□□□□ -0.94
COPB1-210ENST00000533533 ARMCX6Q7L4S7 300 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 DDX42Q86XP3 938 aaKnown RBP eCLIP9.19□□□□□ -0.942e-15■■■■■ 26.8
COPB1-210ENST00000533533 TRIM59Q8IWR1 403 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 TMEFF1Q8IYR6 380 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 FRMD1Q8N878 549 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 B3GALNT2Q8NCR0 500 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 HMGB4Q8WW32 186 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 TATDN2Q93075 761 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 NT5C1BQ96P26 610 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 SLITRK1Q96PX8 696 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 MED15Q96RN5 788 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 SLC32A1Q9H598 525 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 THAP9Q9H5L6 903 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms