RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 GABRB3P28472 473 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 MCM5P33992 734 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 HTR7P34969 479 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 CCDC15Q0P6D6 951 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 MTAPQ13126 283 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 HDAC1Q13547 482 aaPredicted RBP3.2□□□□□ -1.9
ATM-220ENST00000533526 ATP1A4Q13733 1029 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 KCNJ12Q14500 433 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 LARS2Q15031 903 aaKnown RBP3.2□□□□□ -1.9
ATM-220ENST00000533526 EZH2Q15910 746 aaKnown RBP3.2□□□□□ -1.9
ATM-220ENST00000533526 DGKKQ5KSL6 1271 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 ARL6IP4Q66PJ3 421 aaKnown RBP3.2□□□□□ -1.9
ATM-220ENST00000533526 ABLIM2Q6H8Q1 611 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 MIS18BP1Q6P0N0 1132 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 FBXO38Q6PIJ6 1188 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 DCDC5Q6ZRR9 648 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 P3H2Q8IVL5 708 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 CCDC28AQ8IWP9 274 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 GALNT16Q8N428 558 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.2□□□□□ -1.9
ATM-220ENST00000533526 DEPTORQ8TB45 409 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 PARD3BQ8TEW8 1205 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 PMM1Q92871 262 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 GRAMD1AQ96CP6 724 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 EDC3Q96F86 508 aaKnown RBP3.2□□□□□ -1.9
ATM-220ENST00000533526 PCDHAC1Q9H158 963 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 USP29Q9HBJ7 922 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 NRIP3Q9NQ35 241 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 NECTIN3Q9NQS3 549 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 ASIC5Q9NY37 505 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 RGL1Q9NZL6 768 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 LPAR3Q9UBY5 353 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 FZD4Q9ULV1 537 aa3.2□□□□□ -1.9
ATM-220ENST00000533526 ZNF804BA4D1E1 1349 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 SPATA31A1Q5TZJ5 1347 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 WDR17Q8IZU2 1322 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 CYP2D7A0A087X1C5 515 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 TTC34A8MYJ7 566 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 DSCR3O14972 297 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 NCK2O43639 380 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 USP12O75317 370 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 RNF8O76064 485 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 NDST3O95803 873 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 VIPP01282 170 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 IFIT2P09913 472 aaKnown RBP3.19□□□□□ -1.9
ATM-220ENST00000533526 TMIGD3P0DMS9 266 aaPredicted RBP3.19□□□□□ -1.9
ATM-220ENST00000533526 ARP10275 920 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 CYP2A6P11509 494 aaPredicted RBP3.19□□□□□ -1.9
ATM-220ENST00000533526 HARSP12081 509 aaKnown RBP3.19□□□□□ -1.9
ATM-220ENST00000533526 KELP23276 732 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 NEK3P51956 506 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 DEUP1Q05D60 604 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 NSUN2Q08J23 767 aaKnown RBP eCLIP3.19□□□□□ -1.9
ATM-220ENST00000533526 FHL3Q13643 280 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 PMS2P11Q13670 270 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 KCNB1Q14721 858 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 PFKFB3Q16875 520 aaPredicted RBP3.19□□□□□ -1.9
ATM-220ENST00000533526 MAP9Q49MG5 647 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 ZKSCAN2Q63HK3 967 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 RAP1GAP2Q684P5 730 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 RANBP10Q6VN20 620 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 NEK8Q86SG6 692 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 SRLQ86TD4 932 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 GLIS1Q8NBF1 620 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 MAFAQ8NHW3 353 aaPredicted RBP3.19□□□□□ -1.9
ATM-220ENST00000533526 ZNF398Q8TD17 642 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 GJA10Q969M2 543 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 HIC2Q96JB3 615 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 C5orf34Q96MH7 638 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 WDR24Q96S15 920 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 FAM118BQ9BPY3 351 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 ADGRE3Q9BY15 652 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.19□□□□□ -1.95e-6■■■■■ 34.6
ATM-220ENST00000533526 CERS4Q9HA82 394 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 ARFGAP3Q9NP61 516 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 HELLSQ9NRZ9 838 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 GJB4Q9NTQ9 266 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 PI4KBQ9UBF8 816 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 ASAP1Q9ULH1 1129 aa3.19□□□□□ -1.9
ATM-220ENST00000533526 FAM234BA2RU67 622 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 FYB1O15117 783 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 PLA2G6O60733 806 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 GLP2RO95838 553 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 PRR35P0CG20 571 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 SRGAP2BP0DMP2 458 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 ATF7P17544 494 aaPredicted RBP3.18□□□□□ -1.9
ATM-220ENST00000533526 MATN1P21941 496 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 MST1P26927 711 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 DUSP1P28562 367 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 EPHB2P29323 1055 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 MPGP29372 298 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 PBX1P40424 430 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 ABCG1P45844 678 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 GSTM5P46439 218 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 JAK3P52333 1124 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 GPC5P78333 572 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 SSBP2P81877 361 aaPredicted RBP3.18□□□□□ -1.9
ATM-220ENST00000533526 SEMA3BQ13214 749 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 MFSD13AQ14CX5 517 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 FAM110CQ1W6H9 321 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms