RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.25■□□□□ 0.51
NXF1-216ENST00000533499 MARCH2Q9P0N8 246 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 LIMD1Q9UGP4 676 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 ZMYM5Q9UJ78 669 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 DNMT3LQ9UJW3 386 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 USTQ9Y2C2 406 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 ZFP37Q9Y6Q3 630 aaPredicted RBP18.25■□□□□ 0.51
NXF1-216ENST00000533499 SCAMP3O14828 347 aaKnown RBP18.24■□□□□ 0.51
NXF1-216ENST00000533499 DAB1O75553 588 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 NDUFA10O95299 355 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 PRAMEF12O95522 483 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 GLI1P08151 1106 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 MYBL1P10243 752 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 SULT1E1P49888 294 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 TUBP50607 506 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 LRRC8AQ8IWT6 810 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 CCDC112Q8NEF3 446 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 JOSD2Q8TAC2 188 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 USP13Q92995 863 aaPredicted RBP18.24■□□□□ 0.51
NXF1-216ENST00000533499 MCEEQ96PE7 176 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 ZFP14Q9HCL3 533 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 LUC7LQ9NQ29 371 aaKnown RBP18.24■□□□□ 0.51
NXF1-216ENST00000533499 GKN1Q9NS71 199 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 TDP1Q9NUW8 608 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 PARVAQ9NVD7 372 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 CCL26Q9Y258 94 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 EYSQ5T1H1 3165 aa18.24■□□□□ 0.51
NXF1-216ENST00000533499 MSI1O43347 362 aaKnown RBP18.23■□□□□ 0.51
NXF1-216ENST00000533499 FYNP06241 537 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 FECHP22830 423 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 FLT3P36888 993 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 GPC5P78333 572 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 CCDC173Q0VFZ6 552 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 NME3Q13232 169 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 PARM1Q6UWI2 310 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 KIAA1328Q86T90 577 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 TMEM139Q8IV31 216 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 PLCD3Q8N3E9 789 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 ACRBPQ8NEB7 543 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 DQX1Q8TE96 717 aaKnown RBP18.23■□□□□ 0.51
NXF1-216ENST00000533499 SH3RF2Q8TEC5 729 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 RXFP2Q8WXD0 754 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 RNF34Q969K3 372 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 ARHGEF26Q96DR7 871 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 ASB16Q96NS5 453 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 DESI2Q9BSY9 194 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 CTTNBP2NLQ9P2B4 639 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 CFAP97Q9P2B7 532 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 STAP1Q9ULZ2 295 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 SH3BP1Q9Y3L3 701 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 PCDHA13Q9Y5I0 950 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 SCINQ9Y6U3 715 aa18.23■□□□□ 0.51
NXF1-216ENST00000533499 PRUNE2Q8WUY3 3088 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 SIGLEC16A6NMB1 481 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 SOBPA7XYQ1 873 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 EIF3CLB5ME19 914 aaKnown RBP18.22■□□□□ 0.51
NXF1-216ENST00000533499 ZNF263O14978 683 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 PDGFRAP16234 1089 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 PFKLP17858 780 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 GPD1P21695 349 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 SDC4P31431 198 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 NOS2P35228 1153 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 RFC1P35251 1148 aaPredicted RBP18.22■□□□□ 0.51
NXF1-216ENST00000533499 SCNN1AP37088 669 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 MATKP42679 507 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 ATP11AP98196 1134 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 MAMLD1Q13495 774 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 CDO1Q16878 200 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 TANGO2Q6ICL3 276 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 MTSS1LQ765P7 747 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 TAC4Q86UU9 113 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.22■□□□□ 0.51
NXF1-216ENST00000533499 ADHFE1Q8IWW8 467 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 YAF2Q8IY57 180 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 CELF5Q8N6W0 485 aaKnown RBP18.22■□□□□ 0.51
NXF1-216ENST00000533499 RSAD2Q8WXG1 361 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 KHSRPQ92945 711 aaKnown RBP eCLIP18.22■□□□□ 0.51
NXF1-216ENST00000533499 PDLIM2Q96JY6 352 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 ZNF830Q96NB3 372 aaPredicted RBP18.22■□□□□ 0.51
NXF1-216ENST00000533499 SLC2A13Q96QE2 648 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 EIF3CQ99613 913 aaKnown RBP18.22■□□□□ 0.51
NXF1-216ENST00000533499 NUP85Q9BW27 656 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 MRPL47Q9HD33 250 aaKnown RBP18.22■□□□□ 0.51
NXF1-216ENST00000533499 DDIT4Q9NX09 232 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 EPS15L1Q9UBC2 864 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 NENFQ9UMX5 172 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 NUMBLQ9Y6R0 609 aa18.22■□□□□ 0.51
NXF1-216ENST00000533499 HEPACAM2A8MVW5 462 aa18.21■□□□□ 0.51
NXF1-216ENST00000533499 M0QYT0 321 aa18.21■□□□□ 0.51
NXF1-216ENST00000533499 LEFTY2O00292 366 aa18.21■□□□□ 0.51
NXF1-216ENST00000533499 TRUB2O95900 331 aaKnown RBP18.21■□□□□ 0.51
NXF1-216ENST00000533499 ASGR2P07307 311 aa18.21■□□□□ 0.51
NXF1-216ENST00000533499 BMP1P13497 986 aa18.21■□□□□ 0.51
NXF1-216ENST00000533499 GBP1P32455 592 aa18.21■□□□□ 0.51
NXF1-216ENST00000533499 RPL7AP62424 266 aaKnown RBP18.21■□□□□ 0.51
NXF1-216ENST00000533499 PITX1P78337 314 aaPredicted RBP18.21■□□□□ 0.51
NXF1-216ENST00000533499 SLC7A9P82251 487 aa18.21■□□□□ 0.51
NXF1-216ENST00000533499 GRM2Q14416 872 aa18.21■□□□□ 0.51
NXF1-216ENST00000533499 C10orf76Q5T2E6 689 aa18.21■□□□□ 0.51
NXF1-216ENST00000533499 PLEKHA7Q6IQ23 1121 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms