RNA–Protein interactions for RNA: ENST00000532699.1

SDHD-213, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3

Gene SDHD, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-213ENST00000532699 AASDHQ4L235 1098 aaPredicted RBP13.2□□□□□ -0.3
SDHD-213ENST00000532699 COBLL1Q53SF7 1204 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 RAB41Q5JT25 222 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 EGFLAMQ63HQ2 1017 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 KRT39Q6A163 491 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 ANKRD40Q6AI12 368 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 KIAA1211LQ6NV74 962 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 KLHDC10Q6PID8 442 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 CCDC186Q7Z3E2 898 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 EXOC4Q96A65 974 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 VPS45Q9NRW7 570 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 CISHQ9NSE2 258 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 TMEM74BQ9NUR3 256 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 RAB20Q9NX57 234 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 MARK1Q9P0L2 795 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 COQ4Q9Y3A0 265 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 SH3BP1Q9Y3L3 701 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 STARD13Q9Y3M8 1113 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 PCDHA5Q9Y5H7 936 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 CABIN1Q9Y6J0 2220 aa13.2□□□□□ -0.3
SDHD-213ENST00000532699 IGF2RP11717 2491 aa13.19□□□□□ -0.3
SDHD-213ENST00000532699 DMXL2Q8TDJ6 3036 aa13.19□□□□□ -0.3
SDHD-213ENST00000532699 CDX4O14627 284 aaPredicted RBP13.19□□□□□ -0.3
SDHD-213ENST00000532699 CAVIN2O95810 425 aa13.19□□□□□ -0.3
SDHD-213ENST00000532699 GABRG2P18507 467 aa13.19□□□□□ -0.3
SDHD-213ENST00000532699 BMP6P22004 513 aa13.19□□□□□ -0.3
SDHD-213ENST00000532699 ATP5C1P36542 298 aaKnown RBP13.19□□□□□ -0.3
SDHD-213ENST00000532699 WASP42768 502 aa13.19□□□□□ -0.3
SDHD-213ENST00000532699 MXI1P50539 228 aa13.19□□□□□ -0.3
SDHD-213ENST00000532699 ZNF276Q8N554 614 aa13.19□□□□□ -0.3
SDHD-213ENST00000532699 ERLEC1Q96DZ1 483 aa13.19□□□□□ -0.3
SDHD-213ENST00000532699 SLC6A17Q9H1V8 727 aa13.19□□□□□ -0.3
SDHD-213ENST00000532699 FBXO10Q9UK96 956 aa13.19□□□□□ -0.3
SDHD-213ENST00000532699 CLEC4EQ9ULY5 219 aa13.19□□□□□ -0.3
SDHD-213ENST00000532699 FREM2Q5SZK8 3169 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 CHD6Q8TD26 2715 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 TCRBV21S2A2A0A5A6 115 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 WASH3PC4AMC7 463 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 NEDD8-MDP1E9PL57 170 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 KRT13P13646 458 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 TYRP14679 529 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 RPL13P26373 211 aaKnown RBP13.18□□□□□ -0.3
SDHD-213ENST00000532699 GBP1P32455 592 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 PTGER3P43115 390 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 ANO4Q32M45 955 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 HSF5Q4G112 596 aaPredicted RBP13.18□□□□□ -0.3
SDHD-213ENST00000532699 C10orf76Q5T2E6 689 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 N4BP2L1Q5TBK1 243 aaPredicted RBP13.18□□□□□ -0.3
SDHD-213ENST00000532699 ZNF658Q5TYW1 1059 aaPredicted RBP13.18□□□□□ -0.3
SDHD-213ENST00000532699 ARHGAP17Q68EM7 881 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 TPGS1Q6ZTW0 290 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 PIGZQ86VD9 579 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 RBBP8NLQ8NC74 664 aaPredicted RBP13.18□□□□□ -0.3
SDHD-213ENST00000532699 FBXL13Q8NEE6 735 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 HMGB4Q8WW32 186 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 SLC35C1Q96A29 364 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 ZSWIM1Q9BR11 485 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 LSM14BQ9BX40 385 aaKnown RBP13.18□□□□□ -0.3
SDHD-213ENST00000532699 PLK2Q9NYY3 685 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 DEC1Q9P2X7 70 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 CELSR3Q9NYQ7 3312 aa13.18□□□□□ -0.3
SDHD-213ENST00000532699 PLXNB3Q9ULL4 1909 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 TBC1D3BA6NDS4 549 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.17□□□□□ -0.3
SDHD-213ENST00000532699 GIPC1O14908 333 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 RHOBTB1O94844 696 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 KIF20AO95235 890 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 CALCAP01258 141 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 IRX4P78413 519 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 ELF2Q15723 593 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 PKDCCQ504Y2 493 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 USP39Q53GS9 565 aaKnown RBP13.17□□□□□ -0.3
SDHD-213ENST00000532699 EOGTQ5NDL2 527 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 C10orf120Q5SQS8 335 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 FYB2Q5VWT5 728 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 TMEFF1Q8IYR6 380 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 ZNF513Q8N8E2 541 aaPredicted RBP13.17□□□□□ -0.3
SDHD-213ENST00000532699 C12orf50Q8NA57 414 aaPredicted RBP13.17□□□□□ -0.3
SDHD-213ENST00000532699 BHMTQ93088 406 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 CCDC47Q96A33 483 aaKnown RBP13.17□□□□□ -0.3
SDHD-213ENST00000532699 TMEM176AQ96HP8 235 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 HEXIM2Q96MH2 286 aaKnown RBP13.17□□□□□ -0.3
SDHD-213ENST00000532699 EDEM2Q9BV94 578 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 BBS2Q9BXC9 721 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 DNAJC17Q9NVM6 304 aaKnown RBP13.17□□□□□ -0.3
SDHD-213ENST00000532699 DNMT3LQ9UJW3 386 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 NAGPAQ9UK23 515 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 RAD54BQ9Y620 910 aa13.17□□□□□ -0.3
SDHD-213ENST00000532699 PTPRBP23467 1997 aa13.16□□□□□ -0.3
SDHD-213ENST00000532699 C4orf47A7E2U8 309 aa13.16□□□□□ -0.3
SDHD-213ENST00000532699 RNF225M0QZC1 329 aaPredicted RBP13.16□□□□□ -0.3
SDHD-213ENST00000532699 GFRA2O00451 464 aa13.16□□□□□ -0.3
SDHD-213ENST00000532699 CETN3O15182 167 aa13.16□□□□□ -0.3
SDHD-213ENST00000532699 FOXD2O60548 495 aaPredicted RBP13.16□□□□□ -0.3
SDHD-213ENST00000532699 KCNK5O95279 499 aa13.16□□□□□ -0.3
SDHD-213ENST00000532699 PENKP01210 267 aaPredicted RBP13.16□□□□□ -0.3
SDHD-213ENST00000532699 PMLP29590 882 aa13.16□□□□□ -0.3
SDHD-213ENST00000532699 PLA2G4AP47712 749 aa13.16□□□□□ -0.3
SDHD-213ENST00000532699 PDE4CQ08493 712 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms