RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CNOT6LQ96LI5 555 aaKnown RBP18.08■□□□□ 0.48
PHRF1-204ENST00000532550 XPO6Q96QU8 1125 aaKnown RBP18.08■□□□□ 0.48
PHRF1-204ENST00000532550 HHIPQ96QV1 700 aa18.08■□□□□ 0.48
PHRF1-204ENST00000532550 BBS2Q9BXC9 721 aa18.08■□□□□ 0.48
PHRF1-204ENST00000532550 DCLK3Q9C098 648 aa18.08■□□□□ 0.48
PHRF1-204ENST00000532550 INTS2Q9H0H0 1204 aaKnown RBP18.08■□□□□ 0.48
PHRF1-204ENST00000532550 UBE2TQ9NPD8 197 aaPredicted RBP18.08■□□□□ 0.48
PHRF1-204ENST00000532550 AXIN1O15169 862 aa18.07■□□□□ 0.48
PHRF1-204ENST00000532550 TULP3O75386 442 aa18.07■□□□□ 0.48
PHRF1-204ENST00000532550 STC2O76061 302 aa18.07■□□□□ 0.48
PHRF1-204ENST00000532550 APBB3O95704 486 aa18.07■□□□□ 0.48
PHRF1-204ENST00000532550 HMBSP08397 361 aa18.07■□□□□ 0.48
PHRF1-204ENST00000532550 LCP1P13796 627 aa18.07■□□□□ 0.48
PHRF1-204ENST00000532550 ADIGQ0VDE8 80 aa18.07■□□□□ 0.48
PHRF1-204ENST00000532550 CCDC33Q8N5R6 958 aa18.07■□□□□ 0.48
PHRF1-204ENST00000532550 RNF139Q8WU17 664 aa18.07■□□□□ 0.48
PHRF1-204ENST00000532550 NDRG1Q92597 394 aaKnown RBP18.07■□□□□ 0.48
PHRF1-204ENST00000532550 NUP62CLQ9H1M0 184 aa18.07■□□□□ 0.48
PHRF1-204ENST00000532550 MARCH2Q9P0N8 246 aa18.07■□□□□ 0.48
PHRF1-204ENST00000532550 NEDD8-MDP1E9PL57 170 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 RPP40O75818 363 aaKnown RBP18.06■□□□□ 0.48
PHRF1-204ENST00000532550 RETP07949 1114 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 KRT5P13647 590 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 BRD2P25440 801 aaKnown RBP18.06■□□□□ 0.48
PHRF1-204ENST00000532550 TIE1P35590 1138 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 CHKAP35790 457 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 MTIF2P46199 727 aaKnown RBP18.06■□□□□ 0.48
PHRF1-204ENST00000532550 MESP2Q0VG99 397 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 HSF5Q4G112 596 aaPredicted RBP18.06■□□□□ 0.48
PHRF1-204ENST00000532550 PKDCCQ504Y2 493 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 EMC10Q5UCC4 262 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 CLEC17AQ6ZS10 378 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.06■□□□□ 0.48
PHRF1-204ENST00000532550 ETFBKMTQ8IXQ9 262 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 TSTD1Q8NFU3 115 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 SLC35F5Q8WV83 523 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 GAB3Q8WWW8 586 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 FAM81BQ96LP2 452 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 KREMEN1Q96MU8 473 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 MED15Q96RN5 788 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 CRACR2AQ9BSW2 395 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 CNGB3Q9NQW8 809 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 ABCC13Q9NSE7 274 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 OLA1Q9NTK5 396 aaKnown RBP18.06■□□□□ 0.48
PHRF1-204ENST00000532550 MARK1Q9P0L2 795 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 EBF1Q9UH73 591 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 DACH1Q9UI36 760 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 MMP17Q9ULZ9 603 aa18.06■□□□□ 0.48
PHRF1-204ENST00000532550 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.06■□□□□ 0.48
PHRF1-204ENST00000532550 FRYLO94915 3013 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 RALGAPA1Q6GYQ0 2036 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 SPAG17Q6Q759 2223 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 SLC12A8A0AV02 714 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 M0QYV0 167 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 KLF8O95600 359 aaPredicted RBP18.05■□□□□ 0.48
PHRF1-204ENST00000532550 TYRP14679 529 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 ID4P47928 161 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 RGS7P49802 495 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 DGKEP52429 567 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 MFAP3P55082 362 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 CRY1Q16526 586 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 EOGTQ5NDL2 527 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 BSPRYQ5W0U4 402 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 GRAMD4Q6IC98 578 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 PMF1Q6P1K2 205 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 GBP6Q6ZN66 633 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 Q6ZNB5 142 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 ENOSF1Q7L5Y1 443 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 CACNA2D4Q7Z3S7 1137 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 SFTPA1Q8IWL2 248 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 PHTF2Q8N3S3 785 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 ALLCQ8N6M5 410 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 TXNDC5Q8NBS9 432 aaKnown RBP18.05■□□□□ 0.48
PHRF1-204ENST00000532550 HSFY1Q96LI6 401 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 ZSWIM1Q9BR11 485 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 DNAJC17Q9NVM6 304 aaKnown RBP18.05■□□□□ 0.48
PHRF1-204ENST00000532550 USP18Q9UMW8 372 aa18.05■□□□□ 0.48
PHRF1-204ENST00000532550 ANTXRLA6NF34 631 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 YJEFN3A6XGL0 299 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 E7ENQ6 273 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 CALCAP01258 141 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 KLKB1P03952 638 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 CORO1AP31146 461 aaKnown RBP18.04■□□□□ 0.48
PHRF1-204ENST00000532550 KIR2DL1P43626 348 aaPredicted RBP18.04■□□□□ 0.48
PHRF1-204ENST00000532550 ZNF132P52740 706 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 C10orf76Q5T2E6 689 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 IRF2BP1Q8IU81 584 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 DENND1CQ8IV53 801 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 FAM114A1Q8IWE2 563 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 SCML4Q8N228 414 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 FAM160A2Q8N612 972 aaPredicted RBP18.04■□□□□ 0.48
PHRF1-204ENST00000532550 IL17RCQ8NAC3 791 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 KCNV2Q8TDN2 545 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 EDEM1Q92611 657 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 THAP9Q9H5L6 903 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 LMBRD1Q9NUN5 540 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 CNTN6Q9UQ52 1028 aa18.04■□□□□ 0.48
PHRF1-204ENST00000532550 KIAA1549LQ6ZVL6 1849 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 PIK3R2O00459 728 aa18.03■□□□□ 0.48
PHRF1-204ENST00000532550 MED7O43513 233 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms