RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 SCNM1Q9BWG6 230 aa16.02■□□□□ 0.16
BRPF3-210ENST00000532538 NT5C1AQ9BXI3 368 aa16.02■□□□□ 0.16
BRPF3-210ENST00000532538 KLF16Q9BXK1 252 aaPredicted RBP16.02■□□□□ 0.16
BRPF3-210ENST00000532538 ADAM33Q9BZ11 813 aa16.02■□□□□ 0.16
BRPF3-210ENST00000532538 PLK2Q9NYY3 685 aa16.02■□□□□ 0.16
BRPF3-210ENST00000532538 IL37Q9NZH6 218 aa16.02■□□□□ 0.16
BRPF3-210ENST00000532538 DNMT3LQ9UJW3 386 aa16.02■□□□□ 0.16
BRPF3-210ENST00000532538 NAGPAQ9UK23 515 aa16.02■□□□□ 0.16
BRPF3-210ENST00000532538 PILRBQ9UKJ0 227 aa16.02■□□□□ 0.16
BRPF3-210ENST00000532538 RAD54BQ9Y620 910 aa16.02■□□□□ 0.16
BRPF3-210ENST00000532538 A0A1B0GVL5 298 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 A0A1W2PQH9 124 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 KLRC4O43908 158 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 TOP3BO95985 862 aaKnown RBP16.01■□□□□ 0.15
BRPF3-210ENST00000532538 SYPP08247 313 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 HMBSP08397 361 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 PLA2G4AP47712 749 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 PGFP49763 221 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 CLDN10P78369 228 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 CLEC20AQ6ZU45 233 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 GPRIN1Q7Z2K8 1008 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 MIB1Q86YT6 1006 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 TRIML1Q8N9V2 468 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 HSPA12BQ96MM6 686 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 ACOX2Q99424 681 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 CSNK1G1Q9HCP0 422 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 DMAC2Q9NW81 257 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 RASAL2Q9UJF2 1139 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 ZMIZ1Q9ULJ6 1067 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 SCML2Q9UQR0 700 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 PCDHA5Q9Y5H7 936 aa16.01■□□□□ 0.15
BRPF3-210ENST00000532538 KMT2BQ9UMN6 2715 aaPredicted RBP16.01■□□□□ 0.15
BRPF3-210ENST00000532538 SPAARA0A1B0GVQ0 90 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 FAM92AA1XBS5 289 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 IKBKBO14920 756 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 CACNG3O60359 315 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 ASS1P00966 412 aaKnown RBP16■□□□□ 0.15
BRPF3-210ENST00000532538 NDUFV2P19404 249 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 NR2F2P24468 414 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 HOXD12P35452 270 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 ASPAP45381 313 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 GCLMP48507 274 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 SIM1P81133 766 aaPredicted RBP16■□□□□ 0.15
BRPF3-210ENST00000532538 STARD3Q14849 445 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 ZNF394Q53GI3 561 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 SYCP2LQ5T4T6 812 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 TOGARAM2Q6ZUX3 1019 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 HEXIM2Q96MH2 286 aaKnown RBP16■□□□□ 0.15
BRPF3-210ENST00000532538 HNRNPABQ99729 332 aaKnown RBP16■□□□□ 0.15
BRPF3-210ENST00000532538 KCTD10Q9H3F6 313 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 CACNA2D2Q9NY47 1150 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 USP25Q9UHP3 1055 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 RALYQ9UKM9 306 aaKnown RBP16■□□□□ 0.15
BRPF3-210ENST00000532538 MAPK8IP1Q9UQF2 711 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 STARD13Q9Y3M8 1113 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 PCDHB9Q9Y5E1 797 aa16■□□□□ 0.15
BRPF3-210ENST00000532538 CHD8Q9HCK8 2581 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 IGHV1OR15-9A0A0B4J2B8 117 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 ACTN4O43707 911 aaKnown RBP15.99■□□□□ 0.15
BRPF3-210ENST00000532538 SERPINF2P08697 491 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 TRIM49P0CI25 452 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 TRIM49CP0CI26 452 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 GNSP15586 552 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 PFKFB1P16118 471 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 RPL13P26373 211 aaKnown RBP15.99■□□□□ 0.15
BRPF3-210ENST00000532538 ARID5AQ03989 594 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 PLEKHG6Q3KR16 790 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 RSRC2Q7L4I2 434 aaKnown RBP15.99■□□□□ 0.15
BRPF3-210ENST00000532538 MINDY1Q8N5J2 469 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 UCMAQ8WVF2 138 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 SNX21Q969T3 373 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 SPATA32Q96LK8 384 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 TWNKQ96RR1 684 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 SLC6A17Q9H1V8 727 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 CYP3A43Q9HB55 503 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 NMUR1Q9HB89 426 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 CYLDQ9NQC7 956 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 OSER1Q9NX31 292 aa15.99■□□□□ 0.15
BRPF3-210ENST00000532538 A0A1W2PQF6 199 aa15.98■□□□□ 0.15
BRPF3-210ENST00000532538 MEI4A8MW99 385 aa15.98■□□□□ 0.15
BRPF3-210ENST00000532538 WASH3PC4AMC7 463 aa15.98■□□□□ 0.15
BRPF3-210ENST00000532538 PRRT4C9JH25 899 aa15.98■□□□□ 0.15
BRPF3-210ENST00000532538 HYAL3O43820 417 aaPredicted RBP15.98■□□□□ 0.15
BRPF3-210ENST00000532538 CYBBP04839 570 aa15.98■□□□□ 0.15
BRPF3-210ENST00000532538 SYKP43405 635 aa15.98■□□□□ 0.15
BRPF3-210ENST00000532538 PSEN1P49768 467 aa15.98■□□□□ 0.15
BRPF3-210ENST00000532538 EFEMP1Q12805 493 aa15.98■□□□□ 0.15
BRPF3-210ENST00000532538 INTS8Q75QN2 995 aaKnown RBP15.98■□□□□ 0.15
BRPF3-210ENST00000532538 FAM186BQ8IYM0 893 aa15.98■□□□□ 0.15
BRPF3-210ENST00000532538 CDK5RAP1Q96SZ6 601 aaKnown RBP15.98■□□□□ 0.15
BRPF3-210ENST00000532538 DUSP9Q99956 384 aaKnown RBP15.98■□□□□ 0.15
BRPF3-210ENST00000532538 NIF3L1Q9GZT8 377 aa15.98■□□□□ 0.15
BRPF3-210ENST00000532538 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.98■□□□□ 0.15
BRPF3-210ENST00000532538 RCOR1Q9UKL0 485 aa15.98■□□□□ 0.15
BRPF3-210ENST00000532538 ZNF510Q9Y2H8 683 aa15.98■□□□□ 0.15
BRPF3-210ENST00000532538 ARHGAP33O14559 1287 aa15.97■□□□□ 0.15
BRPF3-210ENST00000532538 SYNCRIPO60506 623 aaKnown RBP15.97■□□□□ 0.15
BRPF3-210ENST00000532538 MYL1P05976 194 aa15.97■□□□□ 0.15
BRPF3-210ENST00000532538 CHRM1P11229 460 aaPredicted RBP15.97■□□□□ 0.15
BRPF3-210ENST00000532538 CHKAP35790 457 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms