RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 LGR5O75473 907 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 SUPT3HO75486 399 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 SMPD1P17405 629 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 ITGB5P18084 799 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 IL10P22301 178 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 COILP38432 576 aaPredicted RBP11.66□□□□□ -0.54
PTPRK-221ENST00000532331 CDH8P55286 799 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 HSDL1Q3SXM5 330 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 EARS2Q5JPH6 523 aaKnown RBP11.66□□□□□ -0.54
PTPRK-221ENST00000532331 KIAA1324Q6UXG2 1013 aaKnown RBP11.66□□□□□ -0.54
PTPRK-221ENST00000532331 DLK2Q6UY11 383 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 FAM71DQ8N9W8 422 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 TPCN2Q8NHX9 752 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.66□□□□□ -0.54
PTPRK-221ENST00000532331 DNMT3LQ9UJW3 386 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 PLAGL2Q9UPG8 496 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 SYNDIG1LA6NDD5 238 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 ANKRD63C9JTQ0 380 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 C2CD6Q53TS8 623 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 SPDYAQ5MJ70 313 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 MRNIPQ6NTE8 343 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 ANO5Q75V66 913 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 TFAP2DQ7Z6R9 452 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 RASAL3Q86YV0 1011 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 PPP1R16AQ96I34 528 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 ACO2Q99798 780 aaKnown RBP11.66□□□□□ -0.54
PTPRK-221ENST00000532331 EIF2AQ9BY44 585 aaKnown RBP11.66□□□□□ -0.54
PTPRK-221ENST00000532331 RUBCNLQ9H714 662 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 ZCCHC17Q9NP64 241 aaKnown RBP11.66□□□□□ -0.54
PTPRK-221ENST00000532331 NT5MQ9NPB1 228 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 SUPT3HB4E1H0 165 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 KPNA3O00505 521 aaPredicted RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 PEX10O60683 326 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 PPP1R37O75864 691 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 CLTBP09497 229 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 USP17L7P0C7H9 530 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 STIP1P31948 543 aaKnown RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 TUBP50607 506 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 ALDH18A1P54886 795 aaKnown RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 ACBD5Q5T8D3 534 aaPredicted RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 AGBL2Q5U5Z8 902 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 TTC39BQ5VTQ0 682 aaPredicted RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 PKN3Q6P5Z2 889 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 UNC93AQ86WB7 457 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 OTUB1Q96FW1 271 aaPredicted RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 INPP4AQ96PE3 977 aaPredicted RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 TSPAN18Q96SJ8 248 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 ADAM33Q9BZ11 813 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 FRMD8P1Q9BZ68 369 aaPredicted RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 FAM129AQ9BZQ8 928 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 CDT1Q9H211 546 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 CARD9Q9H257 536 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 PKD2L2Q9NZM6 624 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 PADI3Q9ULW8 664 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 USP18Q9UMW8 372 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 TREHO43280 583 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 CRTAMO95727 393 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 CHN1P15882 459 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 C16orf59Q7L2K0 433 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 SH3BP5LQ7L8J4 393 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 C4orf33Q8N1A6 199 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 RIBC1Q8N443 379 aaPredicted RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 LENG1Q96BZ8 264 aaPredicted RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 MTMR9Q96QG7 549 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 MYCBPQ99417 103 aaPredicted RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 OR6C75A6NL08 312 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 RBAK-RBAKDNI3L0D1 243 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 CDC25CP30307 473 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 ISCUQ9H1K1 167 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 BRD9Q9H8M2 597 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 SMARCAL1Q9NZC9 954 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 YBX3P16989 372 aaKnown RBP eCLIP11.65□□□□□ -0.542e-6■□□□□ 10.6
PTPRK-221ENST00000532331 MZF1P28698 734 aaPredicted RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 CHKAP35790 457 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 HIC1Q14526 733 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 SLC47A2Q86VL8 602 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 SLC13A5Q86YT5 568 aaPredicted RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 NAF1Q96HR8 494 aaKnown RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 GIMAP4Q9NUV9 329 aa11.65□□□□□ -0.54
PTPRK-221ENST00000532331 STX18Q9P2W9 335 aaKnown RBP11.65□□□□□ -0.54
PTPRK-221ENST00000532331 LRRIQ3A6PVS8 624 aaPredicted RBP11.65□□□□□ -0.55
PTPRK-221ENST00000532331 KCNJ1P48048 391 aa11.65□□□□□ -0.55
PTPRK-221ENST00000532331 FNTAP49354 379 aa11.65□□□□□ -0.55
PTPRK-221ENST00000532331 TUSC3Q13454 348 aa11.65□□□□□ -0.55
PTPRK-221ENST00000532331 KCNT1Q5JUK3 1230 aa11.65□□□□□ -0.55
PTPRK-221ENST00000532331 CENPPQ6IPU0 288 aa11.65□□□□□ -0.55
PTPRK-221ENST00000532331 C1orf186Q6ZWK4 172 aa11.65□□□□□ -0.55
PTPRK-221ENST00000532331 GET4Q7L5D6 327 aaPredicted RBP11.65□□□□□ -0.55
PTPRK-221ENST00000532331 MMGT1Q8N4V1 131 aa11.65□□□□□ -0.55
PTPRK-221ENST00000532331 ZSWIM1Q9BR11 485 aa11.65□□□□□ -0.55
PTPRK-221ENST00000532331 SCHIP1Q9P0W5 487 aaPredicted RBP11.65□□□□□ -0.55
PTPRK-221ENST00000532331 WARS2Q9UGM6 360 aaKnown RBP11.65□□□□□ -0.55
PTPRK-221ENST00000532331 TRMT6Q9UJA5 497 aaKnown RBP11.65□□□□□ -0.55
PTPRK-221ENST00000532331 MORC2Q9Y6X9 1032 aaPredicted RBP11.65□□□□□ -0.55
PTPRK-221ENST00000532331 FAM95CA0A1B0GW59 222 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 ANKRD65E5RJM6 399 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 LTFP02788 710 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 PSEN1P49768 467 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 PPP4R4Q6NUP7 873 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms