RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 TMC2Q8TDI7 906 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 BHMTQ93088 406 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 SCNM1Q9BWG6 230 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 GTPBP2Q9BX10 602 aaKnown RBP19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 ADAM33Q9BZ11 813 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 SLC6A17Q9H1V8 727 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 CD93Q9NPY3 652 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 CYLDQ9NQC7 956 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 ZMIZ1Q9ULJ6 1067 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 SCML2Q9UQR0 700 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 STARD13Q9Y3M8 1113 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 RAD54BQ9Y620 910 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 FREM2Q5SZK8 3169 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 PKD1L2Q7Z442 2459 aa19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 CKAP5Q14008 2032 aa19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 IGHV1OR15-9A0A0B4J2B8 117 aa19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 A0A1W2PQH9 124 aa19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 PDXKO00764 312 aa19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 NDUFV2P19404 249 aa19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 ACO1P21399 889 aaKnown RBP19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 IPO4Q8TEX9 1081 aaKnown RBP19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 TMEM174Q8WUU8 243 aa19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 TAF4BQ92750 862 aa19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 P2RY11Q96G91 374 aa19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 XPO6Q96QU8 1125 aaKnown RBP19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 TMEM121BQ9BXQ6 578 aaPredicted RBP19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 APOBEC3GQ9HC16 384 aaKnown RBP19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 CD248Q9HCU0 757 aa19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 LSM7Q9UK45 103 aaKnown RBP19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 CYP8B1Q9UNU6 501 aa19.43■□□□□ 0.7
SSSCA1-206ENST00000531405 A0A1B0GVL5 298 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 SPAARA0A1B0GVQ0 90 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 TRIM49P0CI25 452 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 TRIM49CP0CI26 452 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 RARGP13631 454 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 ZNF33AQ06730 810 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 INCA1Q0VD86 236 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 DUOXA1Q1HG43 343 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 SLC36A4Q6YBV0 504 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 SLC41A1Q8IVJ1 513 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 OR2I1PQ8NGU4 316 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 SNX21Q969T3 373 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 CYFIP2Q96F07 1278 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 HNRNPABQ99729 332 aaKnown RBP19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 CACNA2D2Q9NY47 1150 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 PLK2Q9NYY3 685 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 MARK1Q9P0L2 795 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 WDR35Q9P2L0 1181 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 SLC6A14Q9UN76 642 aa19.42■□□□□ 0.7
SSSCA1-206ENST00000531405 WASH3PC4AMC7 463 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 IKBKBO14920 756 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 HSP90AA1P07900 732 aaKnown RBP19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 PDIA4P13667 645 aaKnown RBP19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 PFKFB1P16118 471 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 CD58P19256 250 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 DPP6P42658 865 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 DGKGP49619 791 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 VAMP7P51809 220 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 ATXN3P54252 364 aaPredicted RBP19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 GFPT1Q06210 699 aaPredicted RBP19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 GOLGA8FQ08AF8 430 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 GOLGA8DPQ0D2H9 430 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 C10orf120Q5SQS8 335 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 SDE2Q6IQ49 451 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 PIP4P1Q86T03 277 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 SPRYD3Q8NCJ5 442 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 HSPA12BQ96MM6 686 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 GABRG3Q99928 467 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 SLC32A1Q9H598 525 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 MMRN2Q9H8L6 949 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 CAPN10Q9HC96 672 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 RCOR1Q9UKL0 485 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 CFAP45Q9UL16 551 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 FRMD4BQ9Y2L6 1034 aa19.41■□□□□ 0.7
SSSCA1-206ENST00000531405 HYAL3O43820 417 aaPredicted RBP19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 KIF20AO95235 890 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 SERPINF2P08697 491 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 CISD3P0C7P0 127 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 PRR29P0C7W0 189 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 HOXD12P35452 270 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 GCLMP48507 274 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 PPP3CAQ08209 521 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 SEMA3BQ13214 749 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 ATL3Q6DD88 541 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 Q6ZNB5 142 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 SCD5Q86SK9 330 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 TRIML1Q8N9V2 468 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 CEP76Q8TAP6 659 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 TAS1R2Q8TE23 839 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 GATA6Q92908 595 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 NT5C1AQ9BXI3 368 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 DNMT3LQ9UJW3 386 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 NAGPAQ9UK23 515 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 PCDHA5Q9Y5H7 936 aa19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 ANKRD11Q6UB99 2663 aaPredicted RBP19.4■□□□□ 0.7
SSSCA1-206ENST00000531405 ZBTB24O43167 697 aaPredicted RBP19.39■□□□□ 0.69
SSSCA1-206ENST00000531405 CALUO43852 315 aaPredicted RBP19.39■□□□□ 0.69
SSSCA1-206ENST00000531405 ZNF217O75362 1048 aa19.39■□□□□ 0.69
SSSCA1-206ENST00000531405 STC2O76061 302 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms