RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 PCDHB2Q9Y5E7 798 aa4.31□□□□□ -1.72
CTR9-205ENST00000529898 MRFAP1Q9Y605 127 aa4.31□□□□□ -1.72
CTR9-205ENST00000529898 CLTCL1P53675 1640 aa4.31□□□□□ -1.72
CTR9-205ENST00000529898 MAGI1Q96QZ7 1491 aaPredicted RBP4.3□□□□□ -1.72
CTR9-205ENST00000529898 WDR7Q9Y4E6 1490 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 NUP160Q12769 1436 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 SBNO2Q9Y2G9 1366 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 CHD1O14646 1710 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 GAKO14976 1311 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 M0QX08 132 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 EBAG9O00559 213 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 CPLX1O14810 134 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 STAMBPO95630 424 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 FGFR1OPO95684 399 aaKnown RBP4.3□□□□□ -1.72
CTR9-205ENST00000529898 GPANK1O95872 356 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 PARP1P09874 1014 aaKnown RBP4.3□□□□□ -1.72
CTR9-205ENST00000529898 CXCR5P32302 372 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 KIF5BP33176 963 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 PSMC4P43686 418 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 LMAN1P49257 510 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 CTCFP49711 727 aaPredicted RBP4.3□□□□□ -1.72
CTR9-205ENST00000529898 PEX5P50542 639 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 VAV2P52735 878 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 C21orf58P58505 322 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 EVA1CP58658 441 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 HSD11B2P80365 405 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 SLFN5Q08AF3 891 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 SNX1Q13596 522 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 ZNF362Q5T0B9 420 aaPredicted RBP4.3□□□□□ -1.72
CTR9-205ENST00000529898 SPATA1Q5VX52 437 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 SP5Q6BEB4 398 aaPredicted RBP4.3□□□□□ -1.72
CTR9-205ENST00000529898 MIS18BP1Q6P0N0 1132 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 B4GALNT4Q76KP1 1039 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.3□□□□□ -1.72
CTR9-205ENST00000529898 LUZP1Q86V48 1076 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 FITM2Q8N6M3 262 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 TEX9Q8N6V9 391 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 ARL10Q8N8L6 244 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 CCDC89Q8N998 374 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 SYT2Q8N9I0 419 aaPredicted RBP4.3□□□□□ -1.72
CTR9-205ENST00000529898 NLGN4YQ8NFZ3 816 aaPredicted RBP4.3□□□□□ -1.72
CTR9-205ENST00000529898 KLHDC4Q8TBB5 520 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 ANKRD49Q8WVL7 239 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.3□□□□□ -1.72
CTR9-205ENST00000529898 IRGQQ8WZA9 623 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 CDKL2Q92772 493 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 ATP6V0A1Q93050 837 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 CFAP36Q96G28 342 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 SNF8Q96H20 258 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 SNX27Q96L92 541 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 CTAGE1Q96RT6 745 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 PNKPQ96T60 521 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 TSC22D3Q99576 134 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 C7orf25Q9BPX7 421 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 PARD6BQ9BYG5 372 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 NACAP1Q9BZK3 213 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 XPO4Q9C0E2 1151 aaKnown RBP4.3□□□□□ -1.72
CTR9-205ENST00000529898 CENPHQ9H3R5 247 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 GSTO2Q9H4Y5 243 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 DDX21Q9NR30 783 aaKnown RBP eCLIP4.3□□□□□ -1.72
CTR9-205ENST00000529898 PDRG1Q9NUG6 133 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 TBCCD1Q9NVR7 557 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 ATXN10Q9UBB4 475 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 HSFX1Q9UBD0 423 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 TNFRSF18Q9Y5U5 241 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 ABCA6Q8N139 1617 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 INO80Q9ULG1 1556 aaPredicted RBP4.3□□□□□ -1.72
CTR9-205ENST00000529898 ATP10AO60312 1499 aa4.3□□□□□ -1.72
CTR9-205ENST00000529898 SH3TC1Q8TE82 1336 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 IQANK1A0A1B0GTG1 560 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 GTPBP10A4D1E9 387 aaKnown RBP4.29□□□□□ -1.72
CTR9-205ENST00000529898 NDUFAB1O14561 156 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 PRC1O43663 620 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 IDH3BO43837 385 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 ZFPL1O95159 310 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 MBD4O95243 580 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 FGAP02671 866 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 CD38P28907 300 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 OAS2P29728 719 aaKnown RBP4.29□□□□□ -1.72
CTR9-205ENST00000529898 TSPAN7P41732 249 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 CASP2P42575 452 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 ACADVLP49748 655 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 PMS2P54278 862 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 ELLP55199 621 aaPredicted RBP4.29□□□□□ -1.72
CTR9-205ENST00000529898 TBX4P57082 545 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 NOMO3P69849 1222 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 SIM1P81133 766 aaPredicted RBP4.29□□□□□ -1.72
CTR9-205ENST00000529898 MRPS25P82663 173 aaKnown RBP4.29□□□□□ -1.72
CTR9-205ENST00000529898 DR1Q01658 176 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 AKAP17AQ02040 695 aaKnown RBP4.29□□□□□ -1.72
CTR9-205ENST00000529898 NHLH1Q02575 133 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 MECOMQ03112 1051 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 KCNB1Q14721 858 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 NOMO2Q5JPE7 1267 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 CFAP157Q5JU67 520 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 CFAP58Q5T655 872 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 KAZNQ674X7 775 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 KIAA0895LQ68EN5 471 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 NCAPH2Q6IBW4 605 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 FBXO42Q6P3S6 717 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms