RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ZNF883P0CG24 379 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 NCAM1P13591 858 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 TYRP14679 529 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 TNNI1P19237 187 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 GJB2P29033 226 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 DGKGP49619 791 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 GRIN1Q05586 938 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 TRPC3Q13507 836 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 SUZ12Q15022 739 aaKnown RBP9.52□□□□□ -0.89
VPS11-203ENST00000529545 E2F5Q15329 346 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 SF3A1Q15459 793 aaKnown RBP9.52□□□□□ -0.89
VPS11-203ENST00000529545 WDR72Q3MJ13 1102 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 SNX30Q5VWJ9 437 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 TMPRSS7Q7RTY8 843 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 TRAPPC11Q7Z392 1133 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 BRAPQ7Z569 592 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 MIB1Q86YT6 1006 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 ZCCHC9Q8N567 271 aaKnown RBP9.52□□□□□ -0.89
VPS11-203ENST00000529545 B3GALNT2Q8NCR0 500 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 ENGASEQ8NFI3 743 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 CADM4Q8NFZ8 388 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 RHBDD1Q8TEB9 315 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 DNASE2BQ8WZ79 361 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 TOE1Q96GM8 510 aaKnown RBP9.52□□□□□ -0.89
VPS11-203ENST00000529545 EPSTI1Q96J88 318 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 ACOX2Q99424 681 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 MED10Q9BTT4 135 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 GPR174Q9BXC1 333 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 B3GNT5Q9BYG0 378 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 GAREM1Q9H706 876 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 CCSER2Q9H7U1 834 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 TM7SF3Q9NS93 570 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 PANK4Q9NVE7 773 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 COMMD8Q9NX08 183 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 RAD54BQ9Y620 910 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 PTPRBP23467 1997 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 CLDN5O00501 218 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 TRIM24O15164 1050 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 BCAT2O15382 392 aaPredicted RBP9.51□□□□□ -0.89
VPS11-203ENST00000529545 FLRT2O43155 660 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 SYNCRIPO60506 623 aaKnown RBP9.51□□□□□ -0.89
VPS11-203ENST00000529545 CBFA2T3O75081 653 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 CILPO75339 1184 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 NEFLP07196 543 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 DLATP10515 647 aaKnown RBP9.51□□□□□ -0.89
VPS11-203ENST00000529545 OXTRP30559 389 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 CASP5P51878 434 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 ZNF132P52740 706 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 CACNA2D1P54289 1103 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 C19orf57Q0VDD7 668 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 LARP1BQ659C4 914 aaKnown RBP9.51□□□□□ -0.89
VPS11-203ENST00000529545 CCDC73Q6ZRK6 1079 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 TPGS1Q6ZTW0 290 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 HTR3DQ70Z44 454 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 CBWD2Q8IUF1 395 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 CCDC65Q8IXS2 484 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 UCMAQ8WVF2 138 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 DNAJC19Q96DA6 116 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 TNIP3Q96KP6 325 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 KCNK16Q96T55 309 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 DPEP3Q9H4B8 488 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 PRDM16Q9HAZ2 1276 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 DMAP1Q9NPF5 467 aaPredicted RBP9.51□□□□□ -0.89
VPS11-203ENST00000529545 TLR8Q9NR97 1041 aaKnown RBP9.51□□□□□ -0.89
VPS11-203ENST00000529545 CACNA2D2Q9NY47 1150 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 WSB2Q9NYS7 404 aaPredicted RBP9.51□□□□□ -0.89
VPS11-203ENST00000529545 NXF1Q9UBU9 619 aaKnown RBP9.51□□□□□ -0.89
VPS11-203ENST00000529545 HCN2Q9UL51 889 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 SMC3Q9UQE7 1217 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 ACACAQ13085 2346 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 PTPRJQ12913 1337 aa9.51□□□□□ -0.89
VPS11-203ENST00000529545 TRABD2BA6NFA1 517 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 PRRT4C9JH25 899 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 NPC1O15118 1278 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 TLR5O60602 858 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 PHACTR2O75167 634 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 ACADMP11310 421 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 SLC5A3P53794 718 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 CYP4F3Q08477 520 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 TEAD4Q15561 434 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 HLA-BQ31612 363 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 DCAF12L1Q5VU92 463 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 SCUBE3Q8IX30 993 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 RDH13Q8NBN7 331 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 SCAMP5Q8TAC9 235 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 PRCCQ92733 491 aaPredicted RBP9.5□□□□□ -0.89
VPS11-203ENST00000529545 SYAP1Q96A49 352 aaPredicted RBP9.5□□□□□ -0.89
VPS11-203ENST00000529545 CCDC127Q96BQ5 260 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 SMARCD1Q96GM5 515 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 BBC3Q96PG8 261 aaPredicted RBP9.5□□□□□ -0.89
VPS11-203ENST00000529545 UBL7Q96S82 380 aaPredicted RBP9.5□□□□□ -0.89
VPS11-203ENST00000529545 NUP58Q9BVL2 599 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 SLC6A17Q9H1V8 727 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 FBXO44Q9H4M3 255 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 CD248Q9HCU0 757 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 ITM2CQ9NQX7 267 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 TMEM30AQ9NV96 361 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 IL37Q9NZH6 218 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 HSPBP1Q9NZL4 362 aa9.5□□□□□ -0.89
VPS11-203ENST00000529545 MARK1Q9P0L2 795 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms