RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 PCOLCE2Q9UKZ9 415 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 VANGL2Q9ULK5 521 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 TMCO1Q9UM00 188 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 GAB2Q9UQC2 676 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 ZBTB1Q9Y2K1 713 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 R3HDM2Q9Y2K5 976 aaKnown RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 ZKSCAN5Q9Y2L8 839 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 DERAQ9Y315 318 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 SH3GLB1Q9Y371 365 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 DTNAQ9Y4J8 743 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 EIF4G3O43432 1585 aaKnown RBP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 RALGAPBQ86X10 1494 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 SHANK2Q9UPX8 1470 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 DNMT1P26358 1616 aaKnown RBP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 A0A087WUV0 522 aaPredicted RBP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 A0A087WV62 115 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 ARHGEF37A1IGU5 675 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 ERICH2A1L162 156 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 TRIM43BA6NCK2 446 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 NUDT19A8MXV4 375 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 MINDY4BA8MYZ0 360 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 FOXO6A8MYZ6 492 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 KIF28PB7ZC32 967 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 H0YIN7 160 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 GOLGA8RI6L899 631 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 FZD9O00144 591 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 NFIBO00712 420 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 TPP1O14773 563 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 LIN7AO14910 233 aaPredicted RBP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 KMOO15229 486 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 FOXP2O15409 715 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 BUB1O43683 1085 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 SYNCRIPO60506 623 aaKnown RBP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 SURF6O75683 361 aaKnown RBP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 TSPAN9O75954 239 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 TOMM70O94826 608 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 CAMTA2O94983 1202 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 FKBP9O95302 570 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 SLU7O95391 586 aaKnown RBP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 SGPL1O95470 568 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 CLPTM1O96005 669 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 B3GALT4O96024 378 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 APOEP02649 317 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 CYP1A1P04798 512 aaPredicted RBP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 ITGB3P05106 788 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 SRGAP2CP0DJJ0 459 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 CALM1P0DP23 149 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 CALM2P0DP24 149 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 CALM3P0DP25 149 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 MYBP10242 640 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 SELLP14151 372 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 PRKACAP17612 351 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 KRT4P19013 534 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 SDSP20132 328 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 ABCB4P21439 1286 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 CCND1P24385 295 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 TBXAS1P24557 533 aaPredicted RBP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 NFKBIAP25963 317 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 PTBP1P26599 531 aaKnown RBP eCLIP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 ALDH3A1P30838 453 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 CCR1P32246 355 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 BMI1P35226 326 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 TAGLN2P37802 199 aaKnown RBP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 IL15P40933 162 aaPredicted RBP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 FXR1P51114 621 aaKnown RBP eCLIP2.91□□□□□ -1.942e-6■■■■□ 20.7
FDFT1-216ENST00000529521 ADARP55265 1226 aaKnown RBP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 ARL4CP56559 192 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 HUNKP57058 714 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 TPM4P67936 248 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 CYP4F2P78329 520 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 ASIC1P78348 528 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 KCNJ10P78508 379 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 ABATP80404 500 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 RBP5P82980 135 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 PRKCEQ02156 737 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 TAP2Q03519 686 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 KRT17Q04695 432 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 GFPT1Q06210 699 aaPredicted RBP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 CYP4F3Q08477 520 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 SLFN5Q08AF3 891 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 ASPHQ12797 758 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 BFSP1Q12934 665 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 GRB10Q13322 594 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 PLD1Q13393 1074 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 CAMK2DQ13557 499 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 COL9A2Q14055 689 aaPredicted RBP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 E2F2Q14209 437 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 DMC1Q14565 340 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 VEPH1Q14D04 833 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 LLGL1Q15334 1064 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 PCBP1Q15365 356 aaKnown RBP eCLIP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 PCBP2Q15366 365 aaKnown RBP eCLIP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 TAF5Q15542 800 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 TRADDQ15628 312 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 ADIPOQQ15848 244 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 ANGEL2Q5VTE6 544 aaKnown RBP2.91□□□□□ -1.94
FDFT1-216ENST00000529521 SHEQ5VZ18 495 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 SIGIRRQ6IA17 410 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 SLC25A24Q6NUK1 477 aa2.91□□□□□ -1.94
FDFT1-216ENST00000529521 JMJD6Q6NYC1 403 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms