RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 CCNT2O60583 730 aaKnown RBP5.44□□□□□ -1.54
CTR9-204ENST00000529355 TAF5LO75529 589 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 DLDP09622 509 aaKnown RBP5.44□□□□□ -1.54
CTR9-204ENST00000529355 TMEM225BP0DP42 221 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 ALADP13716 330 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 GYS1P13807 737 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 DRD1P21728 446 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 TRAPPC10P48553 1259 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 BTKQ06187 659 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 TBC1D25Q3MII6 688 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 CEP85Q6P2H3 762 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 CCDC174Q6PII3 467 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 ZNF527Q8NB42 609 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 ABHD5Q8WTS1 349 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 TBC1D5Q92609 795 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 GRAMD1AQ96CP6 724 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 TM7SF3Q9NS93 570 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 MAGED2Q9UNF1 606 aaPredicted RBP5.44□□□□□ -1.54
CTR9-204ENST00000529355 LRCH1Q9Y2L9 728 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 WNT6Q9Y6F9 365 aa5.44□□□□□ -1.54
CTR9-204ENST00000529355 MANSC4A6NHS7 340 aaPredicted RBP5.43□□□□□ -1.54
CTR9-204ENST00000529355 TISP43B9A030 160 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 HNRNPDLO14979 420 aaKnown RBP5.43□□□□□ -1.54
CTR9-204ENST00000529355 FFAR2O15552 330 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 CYP2D6P10635 497 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 ATF7P17544 494 aaPredicted RBP5.43□□□□□ -1.54
CTR9-204ENST00000529355 SLC5A2P31639 672 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 NANOS3P60323 173 aaKnown RBP5.43□□□□□ -1.54
CTR9-204ENST00000529355 SUMO2P61956 95 aaKnown RBP5.43□□□□□ -1.54
CTR9-204ENST00000529355 GPC5P78333 572 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 HOXA4Q00056 320 aaPredicted RBP5.43□□□□□ -1.54
CTR9-204ENST00000529355 TNFAIP2Q03169 654 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 GRM1Q13255 1194 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 SPARCL1Q14515 664 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 PUM3Q15397 648 aaKnown RBP5.43□□□□□ -1.54
CTR9-204ENST00000529355 ELF2Q15723 593 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 PFKFB4Q16877 469 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 USP17L6PQ6QN14 398 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 ZNF782Q6ZMW2 699 aaPredicted RBP5.43□□□□□ -1.54
CTR9-204ENST00000529355 ZNF788Q6ZQV5 615 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 PIK3AP1Q6ZUJ8 805 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 CHSY1Q86X52 802 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 RAB11FIP4Q86YS3 637 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 ATG16L2Q8NAA4 619 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 DPF1Q92782 380 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 EDC3Q96F86 508 aaKnown RBP5.43□□□□□ -1.54
CTR9-204ENST00000529355 KAZALD1Q96I82 304 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 USP29Q9HBJ7 922 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 NECTIN3Q9NQS3 549 aa5.43□□□□□ -1.54
CTR9-204ENST00000529355 A8MVJ9 347 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 M0QYT0 321 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 TRIM38O00635 465 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 DNPH1O43598 174 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 JTBO76095 146 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 MYCLP12524 364 aaPredicted RBP5.42□□□□□ -1.54
CTR9-204ENST00000529355 CD19P15391 556 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 INHBEP58166 350 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 NSUN2Q08J23 767 aaKnown RBP eCLIP5.42□□□□□ -1.54
CTR9-204ENST00000529355 BFSP2Q13515 415 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 CLCA4Q14CN2 919 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 SMN1Q16637 294 aaKnown RBP5.42□□□□□ -1.54
CTR9-204ENST00000529355 PROSER3Q2NL68 480 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 FAM83BQ5T0W9 1011 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 FAM90A2PQ658T7 463 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 MSANTD2Q6P1R3 559 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 TRIM72Q6ZMU5 477 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 P3H2Q8IVL5 708 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 MAFAQ8NHW3 353 aaPredicted RBP5.42□□□□□ -1.54
CTR9-204ENST00000529355 RITA1Q96K30 269 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 EIF2AQ9BY44 585 aaKnown RBP5.42□□□□□ -1.54
CTR9-204ENST00000529355 TRIM36Q9NQ86 728 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 PCDHB7Q9Y5E2 793 aa5.42□□□□□ -1.54
CTR9-204ENST00000529355 WIPF3A6NGB9 483 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 C16orf96A6NNT2 1141 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 FYB1O15117 783 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 VIPP01282 170 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 ANXA6P08133 673 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 IDEP14735 1019 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 ADRA1DP25100 572 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 GALNSP34059 522 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 RAE1P78406 368 aaKnown RBP5.41□□□□□ -1.54
CTR9-204ENST00000529355 GAB1Q13480 694 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 KCNJ12Q14500 433 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 P3H1Q32P28 736 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 PRAMEF17Q5VTA0 474 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 FCRLBQ6BAA4 426 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 LIN54Q6MZP7 749 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 PRIMA1Q86XR5 153 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 RASGRP3Q8IV61 690 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 SFTPA1Q8IWL2 248 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 DNAJC10Q8IXB1 793 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 LINC01465Q8N7H1 131 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 DDB2Q92466 427 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 SNX18Q96RF0 628 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 PRPF18Q99633 342 aaKnown RBP5.41□□□□□ -1.54
CTR9-204ENST00000529355 GRHPRQ9UBQ7 328 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 COX11Q9Y6N1 276 aa5.41□□□□□ -1.54
CTR9-204ENST00000529355 PNMA6EA0A0J9YXQ4 647 aa5.4□□□□□ -1.54
CTR9-204ENST00000529355 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.4□□□□□ -1.54
CTR9-204ENST00000529355 GOLGA6L3A6NEY3 463 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms