RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 HUS1O60921 280 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 ATG13O75143 517 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 PRPF40AO75400 957 aaKnown RBP9.03□□□□□ -0.96
SSBP3-212ENST00000528930 GJB3O75712 270 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 MICAL2O94851 1124 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 TNNC2P02585 160 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 C4BPAP04003 597 aaKnown RBP9.03□□□□□ -0.96
SSBP3-212ENST00000528930 NR3C1P04150 777 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 BCKDHBP21953 392 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 CDR1P51861 262 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 FAM160A1Q05DH4 1040 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 BFSP1Q12934 665 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 SLC14A1Q13336 389 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 LY6DQ14210 128 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 NFIL3Q16649 462 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 SOWAHAQ2M3V2 549 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 SLC39A12Q504Y0 691 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 CLEC18BQ6UXF7 455 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 Q6ZVU0 165 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 DPH6Q7L8W6 267 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 PRICKLE2Q7Z3G6 844 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 MARCH9Q86YJ5 346 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 SYT12Q8IV01 421 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 MFSD6LQ8IWD5 586 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 TMEM86AQ8N2M4 240 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 CLEC18CQ8NCF0 446 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 CSGALNACT1Q8TDX6 532 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 KBTBD7Q8WVZ9 684 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 SMARCD2Q92925 531 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 CCDC47Q96A33 483 aaKnown RBP9.03□□□□□ -0.96
SSBP3-212ENST00000528930 HPDLQ96IR7 371 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 ZNF512Q96ME7 567 aaPredicted RBP9.03□□□□□ -0.96
SSBP3-212ENST00000528930 TIGD1Q96MW7 591 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 PKMYT1Q99640 499 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 ACBD6Q9BR61 282 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 CORO1BQ9BR76 489 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 TRPV4Q9HBA0 871 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 TMEM74BQ9NUR3 256 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 MAPK8IP1Q9UQF2 711 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 TNFRSF10BO14763 440 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 TRIM66O15016 1216 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 MAPK13O15264 365 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 CHADO15335 359 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 CALUO43852 315 aaPredicted RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 CBFA2T3O75081 653 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 GADD45BO75293 160 aaPredicted RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 SOAT2O75908 522 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 KIF20AO95235 890 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 STAU1O95793 577 aaKnown RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 ATF6P18850 670 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 LMO2P25791 158 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 HOXD12P35452 270 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 TUFMP49411 452 aaKnown RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 KPNA1P52294 538 aaPredicted RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 MARSP56192 900 aaKnown RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 MCCD1P59942 119 aaPredicted RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 DLG4P78352 724 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 RELBQ01201 579 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 SMARCB1Q12824 385 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 MYO1EQ12965 1108 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 PLD1Q13393 1074 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 UBAP2LQ14157 1087 aaKnown RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 CCDC142Q17RM4 750 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 ZCWPW2Q504Y3 356 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 C1orf220Q5T0J3 134 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 TDRD10Q5VZ19 366 aaKnown RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 IQCEQ6IPM2 695 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 PDZD4Q76G19 769 aaPredicted RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 NAXDQ8IW45 347 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 ELOA2Q8IYF1 753 aaPredicted RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 SMYD4Q8IYR2 804 aaPredicted RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 DCP1BQ8IZD4 617 aaKnown RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 ADGRF2Q8IZF7 708 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 GALNT15Q8N3T1 639 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 MINDY1Q8N5J2 469 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 SPPL2BQ8TCT7 592 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 C2orf15Q8WU43 125 aaKnown RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 TTC9Q92623 222 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 ERCC4Q92889 916 aaPredicted RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 MED8Q96G25 268 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 INSM2Q96T92 566 aaPredicted RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 XYLT2Q9H1B5 865 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 POLR3BQ9NW08 1133 aaPredicted RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 DDX43Q9NXZ2 648 aaKnown RBP9.02□□□□□ -0.97
SSBP3-212ENST00000528930 NME7Q9Y5B8 376 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 PCDHB9Q9Y5E1 797 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 PCDHA5Q9Y5H7 936 aa9.02□□□□□ -0.97
SSBP3-212ENST00000528930 ZNF197O14709 1029 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 RRP8O43159 456 aaKnown RBP9.01□□□□□ -0.97
SSBP3-212ENST00000528930 VNN1O95497 513 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 APBB3O95704 486 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 HAPLN1P10915 354 aaPredicted RBP9.01□□□□□ -0.97
SSBP3-212ENST00000528930 MYL4P12829 197 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 GJA1P17302 382 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 WARSP23381 471 aaKnown RBP9.01□□□□□ -0.97
SSBP3-212ENST00000528930 NR2F2P24468 414 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 ACAT1P24752 427 aaKnown RBP9.01□□□□□ -0.97
SSBP3-212ENST00000528930 VIPR2P41587 438 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 DPP6P42658 865 aa9.01□□□□□ -0.97
SSBP3-212ENST00000528930 PRCPP42785 496 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms