RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 ACTR3P61158 418 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 HYIQ5T013 277 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 ATF7IP2Q5U623 682 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 FBXO16Q8IX29 292 aaPredicted RBP18.5■□□□□ 0.55
LTBP3-210ENST00000528516 GALNT4Q8N4A0 578 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 NUF2Q9BZD4 464 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 KCND2Q9NZV8 630 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 KANSL3Q9P2N6 904 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 POLIQ9UNA4 740 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 APOBEC2Q9Y235 224 aaKnown RBP18.5■□□□□ 0.55
LTBP3-210ENST00000528516 DNALI1O14645 258 aaPredicted RBP18.5■□□□□ 0.55
LTBP3-210ENST00000528516 TP73O15350 636 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 RAG1P15918 1043 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 CRABP2P29373 138 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 HADHBP55084 474 aaKnown RBP18.5■□□□□ 0.55
LTBP3-210ENST00000528516 KLHL38Q2WGJ6 581 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 SPDYE2Q495Y8 402 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 MOXD1Q6UVY6 613 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 SH3BP5LQ7L8J4 393 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 GLIS1Q8NBF1 620 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 CD101Q93033 1021 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 NIF3L1Q9GZT8 377 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 PXMP2Q9NR77 195 aa18.5■□□□□ 0.55
LTBP3-210ENST00000528516 CAPN8A6NHC0 703 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 FOLH1Q04609 750 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 UBAP2LQ14157 1087 aaKnown RBP18.49■□□□□ 0.55
LTBP3-210ENST00000528516 PRR5-ARHGAP8B1AHC4 643 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 MAGEC1O60732 1142 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 FUT4P22083 530 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 ARHGAP8P85298 464 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 CES3Q6UWW8 571 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 MECRQ9BV79 373 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 FOXP3Q9BZS1 431 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 THEGQ9P2T0 379 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 ZNF510Q9Y2H8 683 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 BOLA2-SMG1P6H3BVE0 249 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 TM9SF1O15321 606 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 DYNC1LI2O43237 492 aaPredicted RBP18.49■□□□□ 0.55
LTBP3-210ENST00000528516 STRNO43815 780 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 VIL1P09327 827 aaKnown RBP18.49■□□□□ 0.55
LTBP3-210ENST00000528516 KIZQ2M2Z5 673 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 KLHDC10Q6PID8 442 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 TRIM72Q6ZMU5 477 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 OR5B17Q8NGF7 314 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 LRGUKQ96M69 825 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 S100A14Q9HCY8 104 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 LZTS1Q9Y250 596 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 GMEB1Q9Y692 573 aa18.49■□□□□ 0.55
LTBP3-210ENST00000528516 PABPN1LA6NDY0 278 aaKnown RBP18.48■□□□□ 0.55
LTBP3-210ENST00000528516 EDIL3O43854 480 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 TYROBPO43914 113 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 PROSCO94903 275 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 KRT72Q14CN4 511 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 CHI3L2Q15782 390 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 DCAF6Q58WW2 860 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 TREML1Q86YW5 311 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 PACSIN3Q9UKS6 424 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 HOXA10P31260 410 aaPredicted RBP18.48■□□□□ 0.55
LTBP3-210ENST00000528516 FMO1Q01740 532 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 FAM131BQ86XD5 332 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 ALKBH8Q96BT7 664 aaKnown RBP18.48■□□□□ 0.55
LTBP3-210ENST00000528516 ANKEF1Q9NU02 776 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 GTSE1Q9NYZ3 720 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 UBP1Q9NZI7 540 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 CIDEBQ9UHD4 219 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 XPO1O14980 1071 aaKnown RBP18.48■□□□□ 0.55
LTBP3-210ENST00000528516 MLH1P40692 756 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 GARSP41250 739 aaKnown RBP18.48■□□□□ 0.55
LTBP3-210ENST00000528516 NCKAP1LP55160 1127 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 ANKRD20A4Q4UJ75 823 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 ATG16L1Q676U5 607 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 DLK2Q6UY11 383 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 GMCL1P1Q8NEA9 526 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 KREMEN1Q96MU8 473 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 TRIM56Q9BRZ2 755 aaKnown RBP18.48■□□□□ 0.55
LTBP3-210ENST00000528516 YIPF2Q9BWQ6 316 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 DDX43Q9NXZ2 648 aaKnown RBP18.48■□□□□ 0.55
LTBP3-210ENST00000528516 WRAP73Q9P2S5 460 aaPredicted RBP18.48■□□□□ 0.55
LTBP3-210ENST00000528516 PIN4Q9Y237 131 aaKnown RBP18.48■□□□□ 0.55
LTBP3-210ENST00000528516 RIPK3Q9Y572 518 aa18.48■□□□□ 0.55
LTBP3-210ENST00000528516 CYP1A2P05177 515 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 MX2P20592 715 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 GRIA2P42262 883 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 CCR3P51677 355 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 ART3Q13508 389 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 C16orf72Q14CZ0 275 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 CLEC16AQ2KHT3 1053 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 NADK2Q4G0N4 442 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 SPDYAQ5MJ70 313 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 ZCCHC23Q6ZST2 131 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 SKA2Q8WVK7 121 aaPredicted RBP18.47■□□□□ 0.55
LTBP3-210ENST00000528516 SLCO2A1Q92959 643 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 SKA1Q96BD8 255 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 HPDLQ96IR7 371 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 ZNF180Q9UJW8 692 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 SOX13Q9UN79 622 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 ROBO3Q96MS0 1386 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 HUS1O60921 280 aa18.47■□□□□ 0.55
LTBP3-210ENST00000528516 C6orf222P0C671 652 aaPredicted RBP18.47■□□□□ 0.55
LTBP3-210ENST00000528516 PPM1FP49593 454 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms