RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	ACP6	Q9NPH0	428 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	CNGB3	Q9NQW8	809 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	MARCH2	Q9P0N8	246 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	APEX2	Q9UBZ4	518 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	AJAP1	Q9UKB5	411 aa	Predicted RBP	12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	SMG5	Q9UPR3	1016 aa	Known RBP	12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	EP300	Q09472	2414 aa	Predicted RBP	12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	PATJ	Q8NI35	1801 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	GOLGA6L22	H0YM25	854 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	TULP3	O75386	442 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	KAT7	O95251	611 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	HMBS	P08397	361 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	LCP1	P13796	627 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	CORO1A	P31146	461 aa	Known RBP	12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	PXN	P49023	591 aa	Predicted RBP	12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	DAOA	P59103	153 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	COG7	P83436	770 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	SRSF5	Q13243	272 aa	Known RBP	12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	ANO4	Q32M45	955 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	VWA3B	Q502W6	1294 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	CT47A1	Q5JQC4	288 aa	Predicted RBP	12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	BSPRY	Q5W0U4	402 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	BTBD8	Q5XKL5	378 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	DENND1B	Q6P3S1	775 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	SYT13	Q7L8C5	426 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	WDR5B	Q86VZ2	330 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	LONP2	Q86WA8	852 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	NAT16	Q8N8M0	369 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	SHC3	Q92529	594 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	EDEM1	Q92611	657 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	ACD	Q96AP0	544 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	P2RY11	Q96G91	374 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	HSFY1	Q96LI6	401 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	TUBGCP2	Q9BSJ2	902 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	NDST4	Q9H3R1	872 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	ARHGEF4	Q9NR80	690 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	SAMSN1	Q9NSI8	373 aa	Known RBP	12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	MARK1	Q9P0L2	795 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	STRIP2	Q9ULQ0	834 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	SLC8A2	Q9UPR5	921 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	FAM186A	A6NE01	2351 aa		12.32	□□□□□ -0.44
PSMC3-205	ENST00000528362	OTOGL	Q3ZCN5	2332 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362		A0A0A0MRY4	1105 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	SLC12A8	A0AV02	714 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	KCNJ18	B7U540	433 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	NEDD8-MDP1	E9PL57	170 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	PIK3R2	O00459	728 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	TRIM24	O15164	1050 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	HR	O43593	1189 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	CACNG3	O60359	315 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	LETM1	O95202	739 aa	Predicted RBP	12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	APOD	P05090	189 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	PRKCSH	P14314	528 aa	Predicted RBP	12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	TYR	P14679	529 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	GRIA2	P42262	883 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	GPD2	P43304	727 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	KIR2DL1	P43626	348 aa	Predicted RBP	12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	RPL34	P49207	117 aa	Known RBP	12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	KCNJ12	Q14500	433 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	DMC1	Q14565	340 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	MEA1	Q16626	185 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	ARHGAP44	Q17R89	818 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	C2orf27A	Q580R0	203 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	DPY19L2P1	Q6NXN4	242 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	TPGS1	Q6ZTW0	290 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	CCDC26	Q8TAB7	109 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	ENOX1	Q8TC92	643 aa	Known RBP	12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	CLEC4C	Q8WTT0	213 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	IRGQ	Q8WZA9	623 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	RUBCN	Q92622	972 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	FAM81B	Q96LP2	452 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	HHIP	Q96QV1	700 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	BBS2	Q9BXC9	721 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	OLA1	Q9NTK5	396 aa	Known RBP	12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	AGO1	Q9UL18	857 aa	Known RBP	12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	NFE2L3	Q9Y4A8	694 aa		12.31	□□□□□ -0.44
PSMC3-205	ENST00000528362	THAP12	O43422	761 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	GNA15	P30679	374 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	USP8	P40818	1118 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	TRIP4	Q15650	581 aa	Predicted RBP	12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	LPAL2	Q16609	132 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	TCP11X2	Q5H9J9	407 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	EMC10	Q5UCC4	262 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	MSANTD2	Q6P1R3	559 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	C11orf57	Q6ZUT1	292 aa	Predicted RBP	12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	FMNL3	Q8IVF7	1028 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	DCLK2	Q8N568	766 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	CCDC33	Q8N5R6	958 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	TERB1	Q8NA31	727 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	IL17RC	Q8NAC3	791 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	RNF139	Q8WU17	664 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	ZNF606	Q8WXB4	792 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	BHMT	Q93088	406 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	DCLK3	Q9C098	648 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	MIS12	Q9H081	205 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	DNAJC17	Q9NVM6	304 aa	Known RBP	12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	WDR35	Q9P2L0	1181 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	DEC1	Q9P2X7	70 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	SFMBT1	Q9UHJ3	866 aa		12.3	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms