RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 SAFBQ15424 915 aaKnown RBP eCLIP7.43□□□□□ -1.22
VPS26B-204ENST00000527586 CDCA2Q69YH5 1023 aaPredicted RBP7.43□□□□□ -1.22
VPS26B-204ENST00000527586 PPP4R3AQ6IN85 833 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 ASB18Q6ZVZ8 466 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 TMTC3Q6ZXV5 915 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 RAB11FIP2Q7L804 512 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 DTX1Q86Y01 620 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 RAB11FIP4Q86YS3 637 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 C4orf19Q8IY42 314 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 IGDCC4Q8TDY8 1250 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 JPH3Q8WXH2 748 aaPredicted RBP7.43□□□□□ -1.22
VPS26B-204ENST00000527586 P2RY11Q96G91 374 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 RNF38Q9H0F5 515 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 SEMA6CQ9H3T2 930 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 SPHK2Q9NRA0 654 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 EVA1BQ9NVM1 165 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 UCKL1Q9NWZ5 548 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 CNTN3Q9P232 1028 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 KCND3Q9UK17 655 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 PCDHB5Q9Y5E4 795 aa7.43□□□□□ -1.22
VPS26B-204ENST00000527586 DENND4CQ5VZ89 1909 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 MYOFQ9NZM1 2061 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 KIF26BQ2KJY2 2108 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 PRAMEF33A0A0G2JMD5 474 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 CPED1A4D0V7 1026 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 EDIL3O43854 480 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 PRAMEF10O60809 474 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 TCEA3O75764 348 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 ODC1P11926 461 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 FECHP22830 423 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 DGKAP23743 735 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 PTGER4P35408 488 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 PDX1P52945 283 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 LTBQ06643 244 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 SSRP1Q08945 709 aaKnown RBP7.42□□□□□ -1.22
VPS26B-204ENST00000527586 SEPT6Q14141 434 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 DHX8Q14562 1220 aaKnown RBP7.42□□□□□ -1.22
VPS26B-204ENST00000527586 SKOR2Q2VWA4 1001 aaPredicted RBP7.42□□□□□ -1.22
VPS26B-204ENST00000527586 SLC45A4Q5BKX6 768 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 TMPRSS9Q7Z410 1059 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 APBB1IPQ7Z5R6 666 aaPredicted RBP7.42□□□□□ -1.22
VPS26B-204ENST00000527586 DSG4Q86SJ6 1040 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 LRRN4CLQ8ND94 238 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 TPCN2Q8NHX9 752 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 APOBEC4Q8WW27 367 aaKnown RBP7.42□□□□□ -1.22
VPS26B-204ENST00000527586 OTUB2Q96DC9 234 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 XPO6Q96QU8 1125 aaKnown RBP7.42□□□□□ -1.22
VPS26B-204ENST00000527586 NACC1Q96RE7 527 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 LXNQ9BS40 222 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 USP29Q9HBJ7 922 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 SGK2Q9HBY8 427 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 EPB41L5Q9HCM4 733 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 PREBQ9HCU5 417 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 C6orf50Q9HD87 102 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 ZBTB40Q9NUA8 1239 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 BARHL2Q9NY43 387 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 THAP10Q9P2Z0 257 aaPredicted RBP7.42□□□□□ -1.22
VPS26B-204ENST00000527586 PISDQ9UG56 409 aa7.42□□□□□ -1.22
VPS26B-204ENST00000527586 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.41□□□□□ -1.22
VPS26B-204ENST00000527586 NEDD8-MDP1E9PL57 170 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 SH2B2O14492 632 aaPredicted RBP7.41□□□□□ -1.22
VPS26B-204ENST00000527586 CASC3O15234 703 aaKnown RBP7.41□□□□□ -1.22
VPS26B-204ENST00000527586 PRICKLE3O43900 615 aaPredicted RBP7.41□□□□□ -1.22
VPS26B-204ENST00000527586 JAK2O60674 1132 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 DGAT1O75907 488 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 EPHX1P07099 455 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 SNRPB2P08579 225 aaKnown RBP7.41□□□□□ -1.22
VPS26B-204ENST00000527586 JMJD7P0C870 316 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 GIMD1P0DJR0 217 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 ALPPL2P10696 532 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 PFKLP17858 780 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 MX1P20591 662 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 CLCN1P35523 988 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 DGKGP49619 791 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 CDH8P55286 799 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 EIF3IQ13347 325 aaKnown RBP7.41□□□□□ -1.22
VPS26B-204ENST00000527586 ZNF177Q13360 481 aaPredicted RBP7.41□□□□□ -1.22
VPS26B-204ENST00000527586 ENPP2Q13822 863 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 CDKN3Q16667 212 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 TCTN3Q6NUS6 607 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 MAEAQ7L5Y9 396 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 EFL1Q7Z2Z2 1120 aaKnown RBP7.41□□□□□ -1.22
VPS26B-204ENST00000527586 OR2T3Q8NH03 318 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 SERAC1Q96JX3 654 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 SENP8Q96LD8 212 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 SLC29A3Q9BZD2 475 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 C2orf40Q9H1Z8 148 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 GJB4Q9NTQ9 266 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 TMLHEQ9NVH6 421 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 FOXJ2Q9P0K8 574 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 OBSL1O75147 1896 aa7.41□□□□□ -1.22
VPS26B-204ENST00000527586 A0A1W2PQ27 194 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 A0A1W2PQ64 194 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 A0A1W2PQC6 194 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 ZNF891A8MT65 544 aaPredicted RBP7.4□□□□□ -1.22
VPS26B-204ENST00000527586 hCG_1984214I3L0E3 225 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 NPC1O15118 1278 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 NKX2-8O15522 239 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 CACNG3O60359 315 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 CISD3P0C7P0 127 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms