RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 EPHB3P54753 998 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 MAP3K7CLP57077 242 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 SLC44A4Q53GD3 710 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 OR6B2Q6IFH4 312 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 PLEKHA7Q6IQ23 1121 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 SYT10Q6XYQ8 523 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 CLEC20AQ6ZU45 233 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 DNAJB7Q7Z6W7 309 aaPredicted RBP13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 PHLDB2Q86SQ0 1253 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 TMEM110Q86TL2 294 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 ZDHHC17Q8IUH5 632 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 CCDC105Q8IYK2 499 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 ELMOD1Q8N336 334 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 SLC35F6Q8N357 371 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 C3orf20Q8ND61 904 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 TPCN2Q8NHX9 752 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 SHKBP1Q8TBC3 707 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 C2orf15Q8WU43 125 aaKnown RBP13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 KCTD13Q8WZ19 329 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 ZNF592Q92610 1267 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 ASB16Q96NS5 453 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 DDX23Q9BUQ8 820 aaKnown RBP13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 SELENOOQ9BVL4 669 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 IRF2BPLQ9H1B7 796 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 LRRC4Q9HBW1 653 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 OSGEPQ9NPF4 335 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 DMAP1Q9NPF5 467 aaPredicted RBP13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 ASAH2Q9NR71 780 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 FAM86C1Q9NVL1 165 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 DNAI1Q9UI46 699 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 LCMT1Q9UIC8 334 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 ASB3Q9Y575 518 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 RIF1Q5UIP0 2472 aaKnown RBP13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 SHISA7A6NL88 538 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 SIGLEC16A6NMB1 481 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 E5RJQ4 531 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 GOLGA8SH3BPF8 625 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 TULP2O00295 520 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 PALMO75781 387 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 ERBB2P04626 1255 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 LCP1P13796 627 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 GRIK1P39086 918 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 ALDH1A3P47895 512 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 RPL34P49207 117 aaKnown RBP13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 CDR1P51861 262 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 GSCP56915 257 aaPredicted RBP13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 PLD1Q13393 1074 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 MAMLD1Q13495 774 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 TEAD2Q15562 447 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 CFAP221Q4G0U5 840 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 DCUN1D2Q6PH85 259 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 VSTM1Q6UX27 236 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 GAREM2Q75VX8 874 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 PIGZQ86VD9 579 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 XYLT1Q86Y38 959 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 DTWD2Q8NBA8 298 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 KIF18AQ8NI77 898 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 SPPL2BQ8TCT7 592 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 UBE2Q2Q8WVN8 375 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 SMARCD2Q92925 531 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 PSMG2Q969U7 264 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 SMOQ99835 787 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 TRPV4Q9HBA0 871 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 ZFP14Q9HCL3 533 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 CSNK1G1Q9HCP0 422 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 ZNF334Q9HCZ1 680 aaPredicted RBP13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 ABCB6Q9NP58 842 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 ABI2Q9NYB9 513 aaPredicted RBP13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 CAPN6Q9Y6Q1 641 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 DENND4CQ5VZ89 1909 aa13.29□□□□□ -0.28
SSSCA1-203ENST00000526877 CTAGE9A4FU28 777 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 MYO1FO00160 1098 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 STK25O00506 426 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 HAPLN1P10915 354 aaPredicted RBP13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 KRT3P12035 628 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 ATF6P18850 670 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 VIPR2P41587 438 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 MAGEA11P43364 429 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 TUFMP49411 452 aaKnown RBP13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 FAM102AQ5T9C2 384 aaPredicted RBP13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 FAM183BPQ6ZVS7 135 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 DAAM2Q86T65 1068 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 SCN4BQ8IWT1 228 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 SIX6OS1Q8N1H7 587 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 ATOH1Q92858 354 aaPredicted RBP13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 IL21Q9HBE4 155 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 PNPLA8Q9NP80 782 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 CHORDC1Q9UHD1 332 aaPredicted RBP13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 ANAPC7Q9UJX3 599 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 SIT1Q9Y3P8 196 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 MTF2Q9Y483 593 aaPredicted RBP13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 JRKLQ9Y4A0 524 aa13.28□□□□□ -0.28
SSSCA1-203ENST00000526877 PATJQ8NI35 1801 aa13.27□□□□□ -0.28
SSSCA1-203ENST00000526877 MIA3Q5JRA6 1907 aa13.27□□□□□ -0.28
SSSCA1-203ENST00000526877 A0A1W2PRU2 124 aa13.27□□□□□ -0.29
SSSCA1-203ENST00000526877 TCRBV5S1A1TA0A578 114 aa13.27□□□□□ -0.29
SSSCA1-203ENST00000526877 GRID2IPA4D2P6 1211 aa13.27□□□□□ -0.29
SSSCA1-203ENST00000526877 TMEM110-MUSTN1A8MSY1 372 aa13.27□□□□□ -0.29
SSSCA1-203ENST00000526877 PROB1E7EW31 1015 aa13.27□□□□□ -0.29
SSSCA1-203ENST00000526877 PIK3R2O00459 728 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms