RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 IRGQQ8WZA9 623 aa19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 WBP2Q969T9 261 aa19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 UBE2TQ9NPD8 197 aaPredicted RBP19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 ARHGEF4Q9NR80 690 aa19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 GPR179Q6PRD1 2367 aa19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 MDM4O15151 490 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 MTIF2P46199 727 aaKnown RBP19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 DMWDQ09019 674 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 ADIGQ0VDE8 80 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 DMC1Q14565 340 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 EXOC3L4Q17RC7 722 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 DPCR1Q3MIW9 517 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 BHLHA9Q7RTU4 235 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 C12orf40Q86WS4 652 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 TMEM25Q86YD3 366 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 MIB1Q86YT6 1006 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 CREBRFQ8IUR6 639 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 PHTF2Q8N3S3 785 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 XPO6Q96QU8 1125 aaKnown RBP19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 MARCH2Q9P0N8 246 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 DEC1Q9P2X7 70 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 NCDNQ9UBB6 729 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 RASAL2Q9UJF2 1139 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 NUDT5Q9UKK9 219 aa19.33■□□□□ 0.68
TSPAN4-216ENST00000526055 M0QYV0 167 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 MED7O43513 233 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 CACNG3O60359 315 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 FBXO21O94952 628 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 BRD2P25440 801 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 CHKAP35790 457 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 SLC6A11P48066 632 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 EFEMP1Q12805 493 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 SIM2Q14190 667 aaPredicted RBP19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 MAN2A1Q16706 1144 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 ANO4Q32M45 955 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 HEATR6Q6AI08 1181 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 LAIR1Q6GTX8 287 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 PLD4Q96BZ4 506 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 HINFPQ9BQA5 517 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 ZSWIM1Q9BR11 485 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 ABCC13Q9NSE7 274 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 APEX2Q9UBZ4 518 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 EBF1Q9UH73 591 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 GMEB2Q9UKD1 530 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 MMP17Q9ULZ9 603 aa19.32■□□□□ 0.68
TSPAN4-216ENST00000526055 HRO43593 1189 aa19.31■□□□□ 0.68
TSPAN4-216ENST00000526055 TULP3O75386 442 aa19.31■□□□□ 0.68
TSPAN4-216ENST00000526055 APBB3O95704 486 aa19.31■□□□□ 0.68
TSPAN4-216ENST00000526055 KRT5P13647 590 aa19.31■□□□□ 0.68
TSPAN4-216ENST00000526055 DAOAP59103 153 aa19.31■□□□□ 0.68
TSPAN4-216ENST00000526055 BSPRYQ5W0U4 402 aa19.31■□□□□ 0.68
TSPAN4-216ENST00000526055 PMF1Q6P1K2 205 aa19.31■□□□□ 0.68
TSPAN4-216ENST00000526055 STK32AQ8WU08 396 aa19.31■□□□□ 0.68
TSPAN4-216ENST00000526055 RNF139Q8WU17 664 aa19.31■□□□□ 0.68
TSPAN4-216ENST00000526055 CRACR2AQ9BSW2 395 aa19.31■□□□□ 0.68
TSPAN4-216ENST00000526055 BBS2Q9BXC9 721 aa19.31■□□□□ 0.68
TSPAN4-216ENST00000526055 HBS1LQ9Y450 684 aaKnown RBP19.31■□□□□ 0.68
TSPAN4-216ENST00000526055 ATG2BQ96BY7 2078 aa19.31■□□□□ 0.68
TSPAN4-216ENST00000526055 MYOFQ9NZM1 2061 aa19.31■□□□□ 0.68
TSPAN4-216ENST00000526055 SART1O43290 800 aaKnown RBP19.3■□□□□ 0.68
TSPAN4-216ENST00000526055 TYRP14679 529 aa19.3■□□□□ 0.68
TSPAN4-216ENST00000526055 PON1P27169 355 aa19.3■□□□□ 0.68
TSPAN4-216ENST00000526055 KIR2DL1P43626 348 aaPredicted RBP19.3■□□□□ 0.68
TSPAN4-216ENST00000526055 ACADSBP45954 432 aa19.3■□□□□ 0.68
TSPAN4-216ENST00000526055 RPL34P49207 117 aaKnown RBP19.3■□□□□ 0.68
TSPAN4-216ENST00000526055 C2orf27AQ580R0 203 aa19.3■□□□□ 0.68
TSPAN4-216ENST00000526055 RBM43Q6ZSC3 357 aaKnown RBP19.3■□□□□ 0.68
TSPAN4-216ENST00000526055 TRMT11Q7Z4G4 463 aaKnown RBP19.3■□□□□ 0.68
TSPAN4-216ENST00000526055 TERB1Q8NA31 727 aa19.3■□□□□ 0.68
TSPAN4-216ENST00000526055 GAB3Q8WWW8 586 aa19.3■□□□□ 0.68
TSPAN4-216ENST00000526055 STARD13Q9Y3M8 1113 aa19.3■□□□□ 0.68
TSPAN4-216ENST00000526055 DCHS1Q96JQ0 3298 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 SLC12A8A0AV02 714 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 TBC1D3BA6NDS4 549 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 YJEFN3A6XGL0 299 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 E7ENQ6 273 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 NEDD8-MDP1E9PL57 170 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 AXIN1O15169 862 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 LRP3O75074 770 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 KLKB1P03952 638 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 RETP07949 1114 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 CHRM1P11229 460 aaPredicted RBP19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 LCP1P13796 627 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 SLC9A1P19634 815 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 CORO1AP31146 461 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 GPD2P43304 727 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 DGKEP52429 567 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 SEC13P55735 322 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 ZNF445P59923 1031 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 TRIP4Q15650 581 aaPredicted RBP19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 EOGTQ5NDL2 527 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 GRAMD4Q6IC98 578 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 MSANTD2Q6P1R3 559 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 PRR23BQ6ZRT6 265 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 CEP68Q76N32 757 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 CPXM2Q8N436 756 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 NAT16Q8N8M0 369 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 TSTD1Q8NFU3 115 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 SHC3Q92529 594 aa19.29■□□□□ 0.68
TSPAN4-216ENST00000526055 GOLGA1Q92805 767 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms