RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CDK11BP21127 795 aaKnown RBP3.6□□□□□ -1.83
CSDE1-208ENST00000524652 CERS1P27544 350 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 RFX5P48382 616 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-208ENST00000524652 TOB1P50616 345 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-208ENST00000524652 MVPQ14764 893 aaKnown RBP3.6□□□□□ -1.83
CSDE1-208ENST00000524652 TBCCQ15814 346 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 RABL6Q3YEC7 729 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-208ENST00000524652 SLC44A4Q53GD3 710 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 PARP10Q53GL7 1025 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 HSP90AB3PQ58FF7 597 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 SLC10A5Q5PT55 438 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 ANKRD16Q6P6B7 361 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 OLFM4Q6UX06 510 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 ZNF782Q6ZMW2 699 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-208ENST00000524652 ZNF804AQ7Z570 1209 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 NBPF5PQ86XG9 351 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-208ENST00000524652 MIER2Q8N344 545 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 CNBD1Q8NA66 436 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 EXOC6Q8TAG9 804 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 KLHDC4Q8TBB5 520 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 NELL2Q99435 816 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 UTP14AQ9BVJ6 771 aaKnown RBP3.6□□□□□ -1.83
CSDE1-208ENST00000524652 CCDC8Q9H0W5 538 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-208ENST00000524652 BICC1Q9H694 974 aaKnown RBP3.6□□□□□ -1.83
CSDE1-208ENST00000524652 FEZ2Q9UHY8 353 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-208ENST00000524652 LRRFIP2Q9Y608 721 aaKnown RBP3.6□□□□□ -1.83
CSDE1-208ENST00000524652 RAD54BQ9Y620 910 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 DOCK2Q92608 1830 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 CACNA1GO43497 2377 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 ECM29Q5VYK3 1845 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 A0A0G2JLW4 131 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 ZRANB2O95218 330 aaKnown RBP eCLIP3.59□□□□□ -1.83
CSDE1-208ENST00000524652 KIF20AO95235 890 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 CSF1RP07333 972 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 PRR35P0CG20 571 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 DPEP1P16444 411 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 HMGB2P26583 209 aaKnown RBP3.59□□□□□ -1.83
CSDE1-208ENST00000524652 CDKN1CP49918 316 aaPredicted RBP3.59□□□□□ -1.83
CSDE1-208ENST00000524652 CCT4P50991 539 aaKnown RBP3.59□□□□□ -1.83
CSDE1-208ENST00000524652 NEXNQ0ZGT2 675 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 NOGQ13253 232 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 ODF1Q14990 250 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 PTPN21Q16825 1174 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 CRY2Q49AN0 593 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 SFRP4Q6FHJ7 346 aaPredicted RBP3.59□□□□□ -1.83
CSDE1-208ENST00000524652 SLC29A4Q7RTT9 530 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 PPP1R42Q7Z4L9 355 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 NEK8Q86SG6 692 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 ITPRIPQ8IWB1 547 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 FTSJ3Q8IY81 847 aaKnown RBP3.59□□□□□ -1.83
CSDE1-208ENST00000524652 C9orf106Q8NAJ2 232 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 CELF1Q92879 486 aaKnown RBP3.59□□□□□ -1.83
CSDE1-208ENST00000524652 SYT17Q9BSW7 474 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 C1orf43Q9BWL3 253 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 BRIP1Q9BX63 1249 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 CHMP4AQ9BY43 222 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 NYXQ9GZU5 481 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 SLAMF7Q9NQ25 335 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 NRIP3Q9NQ35 241 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 ARHGEF3Q9NR81 526 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 ZBTB40Q9NUA8 1239 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 MRPS18AQ9NVS2 196 aaKnown RBP3.59□□□□□ -1.83
CSDE1-208ENST00000524652 DKK3Q9UBP4 350 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 AGAP1Q9UPQ3 857 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 PA2G4Q9UQ80 394 aaKnown RBP3.59□□□□□ -1.83
CSDE1-208ENST00000524652 SH2B3Q9UQQ2 575 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 SH3TC1Q8TE82 1336 aa3.59□□□□□ -1.83
CSDE1-208ENST00000524652 MYH2Q9UKX2 1941 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 LRRC14BA6NHZ5 514 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 SNAP23O00161 211 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 IPO8O15397 1037 aaKnown RBP3.58□□□□□ -1.84
CSDE1-208ENST00000524652 TLR5O60602 858 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 KATNA1O75449 491 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 UBTFL1P0CB47 393 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-208ENST00000524652 JUPP14923 745 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 CHRM3P20309 590 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 KELP23276 732 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 CTGFP29279 349 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 EPHB2P29323 1055 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 GCLCP48506 637 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-208ENST00000524652 HK3P52790 923 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 TUBA4AP68366 448 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 MAPK7Q13164 816 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 MTX1Q13505 466 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 TMEM119Q4V9L6 283 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 MTX3Q5HYI7 312 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 AARS2Q5JTZ9 985 aaKnown RBP3.58□□□□□ -1.84
CSDE1-208ENST00000524652 VPS53Q5VIR6 699 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 MORN5Q5VZ52 161 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 BHLHA9Q7RTU4 235 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 WDR53Q7Z5U6 358 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-208ENST00000524652 USP37Q86T82 979 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 DTX2Q86UW9 622 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 C2CD5Q86YS7 1000 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 ZNF366Q8N895 744 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 RPL36ALQ969Q0 106 aaKnown RBP3.58□□□□□ -1.84
CSDE1-208ENST00000524652 RGMAQ96B86 450 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 REPS1Q96D71 796 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 FAM167AQ96KS9 214 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 PUS3Q9BZE2 481 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms