RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 MRPL4Q9BYD3 311 aaKnown RBP8.62□□□□□ -1.03
PUM1-213ENST00000524516 RNF38Q9H0F5 515 aa8.62□□□□□ -1.03
PUM1-213ENST00000524516 KCNMB3Q9NPA1 279 aa8.62□□□□□ -1.03
PUM1-213ENST00000524516 TMLHEQ9NVH6 421 aa8.62□□□□□ -1.03
PUM1-213ENST00000524516 EVA1BQ9NVM1 165 aa8.62□□□□□ -1.03
PUM1-213ENST00000524516 VPS54Q9P1Q0 977 aa8.62□□□□□ -1.03
PUM1-213ENST00000524516 ENTPD2Q9Y5L3 495 aa8.62□□□□□ -1.03
PUM1-213ENST00000524516 ABCA2Q9BZC7 2435 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 A0A1W2PPC4 97 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 ARHGAP10A1A4S6 786 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 CYB561D2O14569 222 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 FFAR2O15552 330 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 CACNG3O60359 315 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 NOBOXO60393 691 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 LYPLA2O95372 231 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 EPHX1P07099 455 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 GP1BAP07359 652 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 LIPCP11150 499 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 TYRP14679 529 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 CDC27P30260 824 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 PPP2R3AQ06190 1150 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 ZXDCQ2QGD7 858 aaPredicted RBP8.61□□□□□ -1.03
PUM1-213ENST00000524516 KIAA0895LQ68EN5 471 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 BBS7Q8IWZ6 715 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 SLC34A3Q8N130 599 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 PYM1Q9BRP8 204 aaKnown RBP8.61□□□□□ -1.03
PUM1-213ENST00000524516 TARS2Q9BW92 718 aaKnown RBP8.61□□□□□ -1.03
PUM1-213ENST00000524516 ABCB6Q9NP58 842 aa8.61□□□□□ -1.03
PUM1-213ENST00000524516 PDZD2O15018 2839 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 NPC1O15118 1278 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 HNRNPRO43390 633 aaKnown RBP8.6□□□□□ -1.03
PUM1-213ENST00000524516 IGHV4-34P06331 123 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 CKMT1AP12532 417 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 PRF1P14222 555 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 PAX3P23760 479 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 MATR3P43243 847 aaKnown RBP eCLIP8.6□□□□□ -1.031e-7■■■■□ 22.9
PUM1-213ENST00000524516 RXRGP48443 463 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 NXPH1P58417 271 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 KLRB1Q12918 225 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 TTC31Q49AM3 519 aaPredicted RBP8.6□□□□□ -1.03
PUM1-213ENST00000524516 DCAF6Q58WW2 860 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 PPP1R26Q5T8A7 1209 aaPredicted RBP8.6□□□□□ -1.03
PUM1-213ENST00000524516 WSCD1Q658N2 575 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 RBM44Q6ZP01 1051 aaKnown RBP8.6□□□□□ -1.03
PUM1-213ENST00000524516 TPGS1Q6ZTW0 290 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 SPATA2LQ8IUW3 424 aaPredicted RBP8.6□□□□□ -1.03
PUM1-213ENST00000524516 GALNT11Q8NCW6 608 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 OR4C6Q8NH72 309 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 PDCD6IPQ8WUM4 868 aaKnown RBP8.6□□□□□ -1.03
PUM1-213ENST00000524516 LEO1Q8WVC0 666 aaPredicted RBP8.6□□□□□ -1.03
PUM1-213ENST00000524516 UCMAQ8WVF2 138 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 ARRDC3Q96B67 414 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 ORAI3Q9BRQ5 295 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 LNPKQ9C0E8 428 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 ERVMER34-1Q9H9K5 563 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 SGK2Q9HBY8 427 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 PTPRHQ9HD43 1115 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 PHTF1Q9UMS5 762 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 PCDHB11Q9Y5F2 797 aa8.6□□□□□ -1.03
PUM1-213ENST00000524516 CCDC187A0A096LP49 1063 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 KLF18A0A0U1RQI7 1052 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 CCDC196A0A1B0GTZ2 297 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 ZNF840PA6NDX5 716 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 CCDC169A6NNP5 214 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 TLR4O00206 839 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 LZTS3O60299 673 aaPredicted RBP8.59□□□□□ -1.03
PUM1-213ENST00000524516 BAG4O95429 457 aaKnown RBP8.59□□□□□ -1.03
PUM1-213ENST00000524516 DNTTP04053 509 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 ALPPL2P10696 532 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 IRF1P10914 325 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 TGM2P21980 687 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 PRKCHP24723 683 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 LACTB2Q53H82 288 aaPredicted RBP8.59□□□□□ -1.03
PUM1-213ENST00000524516 SERPINA13PQ6UXR4 307 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 TIPARPQ7Z3E1 657 aaKnown RBP8.59□□□□□ -1.03
PUM1-213ENST00000524516 OR2T3Q8NH03 318 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 IFI44Q8TCB0 444 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 GANCQ8TET4 914 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 RUFY2Q8WXA3 655 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 BHMTQ93088 406 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 GTF3C6Q969F1 213 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 SERAC1Q96JX3 654 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 PLEKHA5Q9HAU0 1116 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 CYLDQ9NQC7 956 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 WDR35Q9P2L0 1181 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 THAP10Q9P2Z0 257 aaPredicted RBP8.59□□□□□ -1.03
PUM1-213ENST00000524516 BRPF3Q9ULD4 1205 aa8.59□□□□□ -1.03
PUM1-213ENST00000524516 RBM8AQ9Y5S9 174 aaKnown RBP8.59□□□□□ -1.03
PUM1-213ENST00000524516 PCSK5Q92824 1860 aa8.58□□□□□ -1.04
PUM1-213ENST00000524516 ARHGEF35A5YM69 484 aa8.58□□□□□ -1.04
PUM1-213ENST00000524516 PLD2O14939 933 aa8.58□□□□□ -1.04
PUM1-213ENST00000524516 CCNT1O60563 726 aaKnown RBP8.58□□□□□ -1.04
PUM1-213ENST00000524516 OLFM2O95897 454 aa8.58□□□□□ -1.04
PUM1-213ENST00000524516 OAS1P00973 400 aaKnown RBP8.58□□□□□ -1.04
PUM1-213ENST00000524516 RARGP13631 454 aa8.58□□□□□ -1.04
PUM1-213ENST00000524516 GCFC2P16383 781 aaKnown RBP8.58□□□□□ -1.04
PUM1-213ENST00000524516 HOXB4P17483 251 aaPredicted RBP8.58□□□□□ -1.04
PUM1-213ENST00000524516 WT1P19544 449 aaPredicted RBP8.58□□□□□ -1.04
PUM1-213ENST00000524516 ANXA13P27216 316 aa8.58□□□□□ -1.04
PUM1-213ENST00000524516 ADD1P35611 737 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms