RNA–Protein interactions for RNA: ENST00000524361.5

LINC00534-204, long intergenic non-protein coding RNA 534, humanhuman

TSL 3

Gene LINC00534, Length 620 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-204ENST00000524361 RLN3Q8WXF3 142 aa6.58□□□□□ -1.36
LINC00534-204ENST00000524361 ATP2A3Q93084 1043 aa6.58□□□□□ -1.36
LINC00534-204ENST00000524361 FUBP3Q96I24 572 aaKnown RBP eCLIP6.58□□□□□ -1.36
LINC00534-204ENST00000524361 SEC16BQ96JE7 1060 aa6.58□□□□□ -1.36
LINC00534-204ENST00000524361 SPATA17Q96L03 361 aa6.58□□□□□ -1.36
LINC00534-204ENST00000524361 ZNF396Q96N95 335 aaPredicted RBP6.58□□□□□ -1.36
LINC00534-204ENST00000524361 KCTD15Q96SI1 283 aaPredicted RBP6.58□□□□□ -1.36
LINC00534-204ENST00000524361 C7orf25Q9BPX7 421 aa6.58□□□□□ -1.36
LINC00534-204ENST00000524361 NIF3L1Q9GZT8 377 aa6.58□□□□□ -1.36
LINC00534-204ENST00000524361 DUSP15Q9H1R2 295 aaPredicted RBP6.58□□□□□ -1.36
LINC00534-204ENST00000524361 CFAP97Q9P2B7 532 aa6.58□□□□□ -1.36
LINC00534-204ENST00000524361 ZMYM5Q9UJ78 669 aa6.58□□□□□ -1.36
LINC00534-204ENST00000524361 PCDHA7Q9UN72 937 aa6.58□□□□□ -1.36
LINC00534-204ENST00000524361 ARHGAP26Q9UNA1 814 aa6.58□□□□□ -1.36
LINC00534-204ENST00000524361 CPQQ9Y646 472 aa6.58□□□□□ -1.36
LINC00534-204ENST00000524361 FIGNL2A6NMB9 653 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 TTLL8A6PVC2 850 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 PATE3B3GLJ2 98 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 TM4SF5O14894 197 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 KIAA0391O15091 583 aaKnown RBP6.57□□□□□ -1.36
LINC00534-204ENST00000524361 TRIM24O15164 1050 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 SPINT1O43278 529 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 CUTAO60888 179 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 LRP3O75074 770 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 TACC1O75410 805 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 EPN2O95208 641 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 KLF8O95600 359 aaPredicted RBP6.57□□□□□ -1.36
LINC00534-204ENST00000524361 APBB3O95704 486 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 CAVIN2O95810 425 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 CYP17A1P05093 508 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 ADRB1P08588 477 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 MBL2P11226 248 aaPredicted RBP6.57□□□□□ -1.36
LINC00534-204ENST00000524361 HNRNPLP14866 589 aaKnown RBP eCLIP6.57□□□□□ -1.364e-7■■■□□ 15
LINC00534-204ENST00000524361 BCKDHBP21953 392 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 MPLP40238 635 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 WASP42768 502 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 ME1P48163 572 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 PGFP49763 221 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 DLG4P78352 724 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 BIRC3Q13489 604 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 BIRC2Q13490 618 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 DHCR24Q15392 516 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 MAPRE1Q15691 268 aaKnown RBP6.57□□□□□ -1.36
LINC00534-204ENST00000524361 KNOP1Q1ED39 458 aaKnown RBP6.57□□□□□ -1.36
LINC00534-204ENST00000524361 GAB4Q2WGN9 574 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 FBXO43Q4G163 708 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 STPG1Q5TH74 334 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 VSTM1Q6UX27 236 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 PAQR9Q6ZVX9 377 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 UNC13DQ70J99 1090 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 SYT13Q7L8C5 426 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 C12orf40Q86WS4 652 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 DEFB119Q8N690 84 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 ALLCQ8N6M5 410 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 B3GALNT2Q8NCR0 500 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 TSTD1Q8NFU3 115 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 USP33Q8TEY7 942 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 WBP2Q969T9 261 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 C8orf48Q96LL4 319 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 SRPK1Q96SB4 655 aaKnown RBP6.57□□□□□ -1.36
LINC00534-204ENST00000524361 CGRRF1Q99675 332 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 MED10Q9BTT4 135 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 LRRC27Q9C0I9 530 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 SDCBP2Q9H190 292 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 XYLT2Q9H1B5 865 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 SMYD3Q9H7B4 428 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 KIAA1586Q9HCI6 787 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 STIM2Q9P246 746 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 SERTAD1Q9UHV2 236 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 CACNA1AO00555 2505 aa6.57□□□□□ -1.36
LINC00534-204ENST00000524361 SPTBN2O15020 2390 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 CCDC163A0A0D9SF12 145 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 LRRIQ3A6PVS8 624 aaPredicted RBP6.56□□□□□ -1.36
LINC00534-204ENST00000524361 C4orf47A7E2U8 309 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 SGK1O00141 431 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 GIPC1O14908 333 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 EIF3DO15371 548 aaKnown RBP eCLIP6.56□□□□□ -1.36
LINC00534-204ENST00000524361 COCHO43405 550 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 BEST1O76090 585 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 VNN1O95497 513 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 NFATC1O95644 943 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 TBX18O95935 607 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 C4BPAP04003 597 aaKnown RBP6.56□□□□□ -1.36
LINC00534-204ENST00000524361 ZSCAN22P10073 491 aaPredicted RBP6.56□□□□□ -1.36
LINC00534-204ENST00000524361 IRF1P10914 325 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 CCDC130P13994 396 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 YWHAQP27348 245 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 NOP14P78316 857 aaKnown RBP6.56□□□□□ -1.36
LINC00534-204ENST00000524361 IRX4P78413 519 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 SLC7A9P82251 487 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 PTSQ03393 145 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 DNM1Q05193 864 aaKnown RBP6.56□□□□□ -1.36
LINC00534-204ENST00000524361 KDSRQ06136 332 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 STK4Q13043 487 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 ELF2Q15723 593 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 USP39Q53GS9 565 aaKnown RBP6.56□□□□□ -1.36
LINC00534-204ENST00000524361 LY6G5CQ5SRR4 150 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 RNF43Q68DV7 783 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 SPOPLQ6IQ16 392 aa6.56□□□□□ -1.36
LINC00534-204ENST00000524361 ARMCX6Q7L4S7 300 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms