RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 SUPT20HQ8NEM7 779 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 TOR1AIP2Q8NFQ8 470 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 IL17REQ8NFR9 667 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 SPPL3Q8TCT6 385 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 R3HDM4Q96D70 268 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 BOD1Q96IK1 185 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 DDX23Q9BUQ8 820 aaKnown RBP6.67□□□□□ -1.34
SKP1-213ENST00000524288 VN1R3Q9BXE9 311 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 INO80BQ9C086 356 aaPredicted RBP6.67□□□□□ -1.34
SKP1-213ENST00000524288 VPS16Q9H269 839 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 CYP4F11Q9HBI6 524 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 DRG1Q9Y295 367 aaKnown RBP6.67□□□□□ -1.34
SKP1-213ENST00000524288 PCSK5Q92824 1860 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 FAM90A18PA6NE21 464 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 FAM90A16PA6NEW6 464 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 FAM90A9PA6NNJ1 464 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 ZAR1LA6NP61 321 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 FAM90A5PA8MXJ8 464 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 EXOC5O00471 708 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 DHHO43323 396 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 SPDEFO95238 335 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 FESP07332 822 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 FAM90A15PP0C7V4 464 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 FAM90A14PP0C7W9 464 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 PEPDP12955 493 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 BMP5P22003 454 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 AARSP49588 968 aaKnown RBP eCLIP6.66□□□□□ -1.344e-6■■■■□ 24
SKP1-213ENST00000524288 POLE2P56282 527 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 TIAL1Q01085 375 aaKnown RBP eCLIP6.66□□□□□ -1.34
SKP1-213ENST00000524288 TMEM196Q5HYL7 178 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 SP5Q6BEB4 398 aaPredicted RBP6.66□□□□□ -1.34
SKP1-213ENST00000524288 TTC30AQ86WT1 665 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 TMTC1Q8IUR5 882 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 HERC6Q8IVU3 1022 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 SUN3Q8TAQ9 357 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 MYCBPAPQ8TBZ2 947 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 THAP4Q8WY91 577 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 PTCD3Q96EY7 689 aaKnown RBP6.66□□□□□ -1.34
SKP1-213ENST00000524288 ZDHHC12Q96GR4 267 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 MECRQ9BV79 373 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 GLOD4Q9HC38 313 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 PDP2Q9P2J9 529 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 KCND3Q9UK17 655 aa6.66□□□□□ -1.34
SKP1-213ENST00000524288 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.66□□□□□ -1.34
SKP1-213ENST00000524288 EPB41L2O43491 1005 aaKnown RBP6.65□□□□□ -1.34
SKP1-213ENST00000524288 PAPOLAP51003 745 aaKnown RBP6.65□□□□□ -1.34
SKP1-213ENST00000524288 ATXN1P54253 815 aaKnown RBP6.65□□□□□ -1.34
SKP1-213ENST00000524288 TIRAPP58753 221 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 BLOC1S1P78537 153 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 PDCLQ13371 301 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 SLC12A1Q13621 1099 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 HECTD2Q5U5R9 776 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 ARMC6Q6NXE6 501 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 MSANTD2Q6P1R3 559 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 SYNE3Q6ZMZ3 975 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 RAB11FIP2Q7L804 512 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 SYT13Q7L8C5 426 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 MAATS1Q7Z4T9 603 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 CAND1Q86VP6 1230 aaKnown RBP6.65□□□□□ -1.34
SKP1-213ENST00000524288 ESX1Q8N693 406 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 CEP70Q8NHQ1 597 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 HMGB4Q8WW32 186 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 XAGE5Q8WWM1 108 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 WDR24Q96S15 920 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 SERHL2Q9H4I8 314 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 CHODLQ9H9P2 273 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 TMEM74BQ9NUR3 256 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 ANKFY1Q9P2R3 1169 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 DKK2Q9UBU2 259 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 PGAP2Q9UHJ9 254 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 GJD2Q9UKL4 321 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 CNTN6Q9UQ52 1028 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 PCDHB7Q9Y5E2 793 aa6.65□□□□□ -1.34
SKP1-213ENST00000524288 POLR2AP24928 1970 aaKnown RBP6.64□□□□□ -1.35
SKP1-213ENST00000524288 A0A1B0GVC2 190 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 A1L4Q6 167 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 PRRT4C9JH25 899 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 J3KRW8 73 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 WDR47O94967 919 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 ZEB1P37275 1124 aaPredicted RBP6.64□□□□□ -1.35
SKP1-213ENST00000524288 LIPAP38571 399 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 AVPR1BP47901 424 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 TUBP50607 506 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 GEMIN4P57678 1058 aaKnown RBP6.64□□□□□ -1.35
SKP1-213ENST00000524288 RNASELQ05823 741 aaKnown RBP6.64□□□□□ -1.35
SKP1-213ENST00000524288 BFSP2Q13515 415 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 SIM2Q14190 667 aaPredicted RBP6.64□□□□□ -1.35
SKP1-213ENST00000524288 CSHL1Q14406 222 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 TBCCQ15814 346 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 GALNTL6Q49A17 601 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 TREML2Q5T2D2 321 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 TTC22Q5TAA0 569 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 WDR78Q5VTH9 848 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 NFRKBQ6P4R8 1299 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 Q6YL49 198 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 GPR149Q86SP6 731 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 NAXEQ8NCW5 288 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 OR6Y1Q8NGX8 325 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 WDR60Q8WVS4 1066 aa6.64□□□□□ -1.35
SKP1-213ENST00000524288 MAELQ96JY0 434 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms