RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.62■□□□□ 0.73
SPIDR-220ENST00000522900 SGK1O00141 431 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 DCLK1O15075 740 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 P4HA2O15460 535 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 GNA14O95837 355 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 HMBSP08397 361 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 CCDC192P0DO97 292 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 TNFRSF4P43489 277 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 SLC8A3P57103 927 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 MRPS21P82921 87 aaKnown RBP19.62■□□□□ 0.73
SPIDR-220ENST00000522900 GOLGA8FQ08AF8 430 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 GOLGA8DPQ0D2H9 430 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 BST2Q10589 180 aaKnown RBP19.62■□□□□ 0.73
SPIDR-220ENST00000522900 RSPO4Q2I0M5 234 aaPredicted RBP19.62■□□□□ 0.73
SPIDR-220ENST00000522900 PKDCCQ504Y2 493 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 GPR161Q8N6U8 529 aaKnown RBP19.62■□□□□ 0.73
SPIDR-220ENST00000522900 BBS2Q9BXC9 721 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 DEC1Q9P2X7 70 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 HESX1Q9UBX0 185 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 EBF1Q9UH73 591 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 KIAA1257Q9ULG3 409 aa19.62■□□□□ 0.73
SPIDR-220ENST00000522900 SPTBN4Q9H254 2564 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 NEDD8-MDP1E9PL57 170 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 AFPP02771 609 aaKnown RBP19.61■□□□□ 0.73
SPIDR-220ENST00000522900 PAEPP09466 180 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 TYRP14679 529 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 DGKEP52429 567 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 CETN1Q12798 172 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 CRY1Q16526 586 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 LCLAT1Q6UWP7 414 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 CACNA2D4Q7Z3S7 1137 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 TADA2BQ86TJ2 420 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 ARHGAP18Q8N392 663 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 TSTD1Q8NFU3 115 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 BHMTQ93088 406 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 KREMEN1Q96MU8 473 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 TPSD1Q9BZJ3 242 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 INTS2Q9H0H0 1204 aaKnown RBP19.61■□□□□ 0.73
SPIDR-220ENST00000522900 LRRC4Q9HBW1 653 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 SEMA4GQ9NTN9 838 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 MARCH2Q9P0N8 246 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 RWDD2AQ9UIY3 292 aa19.61■□□□□ 0.73
SPIDR-220ENST00000522900 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.61■□□□□ 0.73
SPIDR-220ENST00000522900 MYO16Q9Y6X6 1858 aa19.6■□□□□ 0.73
SPIDR-220ENST00000522900 MYOFQ9NZM1 2061 aa19.6■□□□□ 0.73
SPIDR-220ENST00000522900 SLC12A8A0AV02 714 aa19.6■□□□□ 0.73
SPIDR-220ENST00000522900 ADAM23O75077 832 aa19.6■□□□□ 0.73
SPIDR-220ENST00000522900 BRD2P25440 801 aaKnown RBP19.6■□□□□ 0.73
SPIDR-220ENST00000522900 RGS7P49802 495 aa19.6■□□□□ 0.73
SPIDR-220ENST00000522900 ADIGQ0VDE8 80 aa19.6■□□□□ 0.73
SPIDR-220ENST00000522900 CCDC6Q16204 474 aa19.6■□□□□ 0.73
SPIDR-220ENST00000522900 ANO7Q6IWH7 933 aa19.6■□□□□ 0.73
SPIDR-220ENST00000522900 IRF2BP1Q8IU81 584 aa19.6■□□□□ 0.73
SPIDR-220ENST00000522900 CREBRFQ8IUR6 639 aa19.6■□□□□ 0.73
SPIDR-220ENST00000522900 RBBP8NLQ8NC74 664 aaPredicted RBP19.6■□□□□ 0.73
SPIDR-220ENST00000522900 SLC35F5Q8WV83 523 aa19.6■□□□□ 0.73
SPIDR-220ENST00000522900 KCTD13Q8WZ19 329 aa19.6■□□□□ 0.73
SPIDR-220ENST00000522900 CDK5RAP1Q96SZ6 601 aaKnown RBP19.6■□□□□ 0.73
SPIDR-220ENST00000522900 DNAJC17Q9NVM6 304 aaKnown RBP19.6■□□□□ 0.73
SPIDR-220ENST00000522900 DLL3Q9NYJ7 618 aa19.6■□□□□ 0.73
SPIDR-220ENST00000522900 PLK2Q9NYY3 685 aa19.6■□□□□ 0.73
SPIDR-220ENST00000522900 MARK1Q9P0L2 795 aa19.6■□□□□ 0.73
SPIDR-220ENST00000522900 DCHS1Q96JQ0 3298 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 YJEFN3A6XGL0 299 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 E7ENQ6 273 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 PIK3R2O00459 728 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 CACNG3O60359 315 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 CISD3P0C7P0 127 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 LCP1P13796 627 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 CORO1AP31146 461 aaKnown RBP19.59■□□□□ 0.73
SPIDR-220ENST00000522900 COG7P83436 770 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 GCNT1Q02742 428 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 CNGA2Q16280 664 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 PLK5Q496M5 336 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 C10orf76Q5T2E6 689 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 PMF1Q6P1K2 205 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 TOGARAM2Q6ZUX3 1019 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 RSRC2Q7L4I2 434 aaKnown RBP19.59■□□□□ 0.73
SPIDR-220ENST00000522900 RASSF3Q86WH2 238 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 TERB1Q8NA31 727 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 EDEM1Q92611 657 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 ZC3H10Q96K80 434 aaKnown RBP19.59■□□□□ 0.73
SPIDR-220ENST00000522900 DUSP15Q9H1R2 295 aaPredicted RBP19.59■□□□□ 0.73
SPIDR-220ENST00000522900 ARRDC1-AS1Q9H2J1 176 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 WDR35Q9P2L0 1181 aa19.59■□□□□ 0.73
SPIDR-220ENST00000522900 AGO1Q9UL18 857 aaKnown RBP19.59■□□□□ 0.73
SPIDR-220ENST00000522900 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.59■□□□□ 0.737e-6■■■■■ 27.7
SPIDR-220ENST00000522900 PRRT4C9JH25 899 aa19.58■□□□□ 0.72
SPIDR-220ENST00000522900 FGFR1OPO95684 399 aaKnown RBP19.58■□□□□ 0.72
SPIDR-220ENST00000522900 SETSIPP0DME0 302 aa19.58■□□□□ 0.72
SPIDR-220ENST00000522900 ZNF132P52740 706 aa19.58■□□□□ 0.72
SPIDR-220ENST00000522900 BSPRYQ5W0U4 402 aa19.58■□□□□ 0.72
SPIDR-220ENST00000522900 GRAMD4Q6IC98 578 aa19.58■□□□□ 0.72
SPIDR-220ENST00000522900 MDGA1Q8NFP4 955 aa19.58■□□□□ 0.72
SPIDR-220ENST00000522900 IPO9Q96P70 1041 aaKnown RBP19.58■□□□□ 0.72
SPIDR-220ENST00000522900 XPO6Q96QU8 1125 aaKnown RBP19.58■□□□□ 0.72
SPIDR-220ENST00000522900 CRACR2AQ9BSW2 395 aa19.58■□□□□ 0.72
SPIDR-220ENST00000522900 CLSTN2Q9H4D0 955 aa19.58■□□□□ 0.72
SPIDR-220ENST00000522900 UBE2TQ9NPD8 197 aaPredicted RBP19.58■□□□□ 0.72
SPIDR-220ENST00000522900 SFMBT1Q9UHJ3 866 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms