RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 KLC4Q9NSK0 619 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 FAM198AQ9UFP1 575 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 DCDC2Q9UHG0 476 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 C16orf96A6NNT2 1141 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 GPC1P35052 558 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 KBTBD12Q3ZCT8 623 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 JADE3Q92613 823 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 UROC1Q96N76 676 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 CCDC3Q9BQI4 270 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 OSBPL1AQ9BXW6 950 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 MFSD1Q9H3U5 465 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 LACTBL1A8MY62 500 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 IGSF6O95976 241 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 CNGA3Q16281 694 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 IRAK1BP1Q5VVH5 260 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 VCPIP1Q96JH7 1222 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 IGFLR1Q9H665 355 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 A0A0A6YYK5 440 aaPredicted RBP16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 MYO1GB0I1T2 1018 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 RBP1P09455 135 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 ITGA9Q13797 1035 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 NLRP9Q7RTR0 991 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 SLC47A2Q86VL8 602 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 OSCP1Q8WVF1 389 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 SERPINB12Q96P63 405 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 PHF20L1A8MW92 1017 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 RECQL4O94761 1208 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 EIF4BP23588 611 aaKnown RBP16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 PBLDP30039 288 aaPredicted RBP16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 ACTN3Q08043 901 aaPredicted RBP16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 TJAP1Q5JTD0 557 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 SUGP1Q8IWZ8 645 aaKnown RBP16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 CLEC4FQ8N1N0 589 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 KRT78Q8N1N4 520 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 C3orf20Q8ND61 904 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 CYP39A1Q9NYL5 469 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 KIAA1210Q9ULL0 1709 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 PXDNQ92626 1479 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 KDM4FA0A1W2PPD8 638 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 IGF2BP3O00425 579 aaKnown RBP eCLIP16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 CYP2F1P24903 491 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 ANKS6Q68DC2 871 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 RFX8Q6ZV50 586 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 MAP4K3Q8IVH8 894 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 MANSC1Q9H8J5 431 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 SMARCAL1Q9NZC9 954 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 BLOC1S6Q9UL45 172 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 MAGEB16A2A368 324 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 PDZK1P1A8MUH7 402 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 ADCY6O43306 1168 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 AKAP10O43572 662 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 CD44P16070 742 aaKnown RBP16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 PSMA3P25788 255 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 CHI3L2Q15782 390 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 NFIL3Q16649 462 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 SLC39A12Q504Y0 691 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 ZFPM1Q8IX07 1006 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 NKX2-3Q8TAU0 364 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 TMEM134Q9H6X4 195 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 PLA2G6O60733 806 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 TOMM70O94826 608 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 PTPN3P26045 913 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 ARMC2Q8NEN0 867 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 TUBGCP3Q96CW5 907 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 AGXT2Q9BYV1 514 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 VPS51Q9UID3 782 aa16.73■□□□□ 0.27
PCDHA3-201ENST00000522353 AIM2O14862 343 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 PJA2O43164 708 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 PLEKP08567 350 aaPredicted RBP16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 MSH3P20585 1137 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 CNTFP26441 200 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 TUBP50607 506 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 STX5Q13190 355 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 ICE2Q659A1 982 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 LPCAT1Q8NF37 534 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 ERP27Q96DN0 273 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 ZNF333Q96JL9 665 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 SENP8Q96LD8 212 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 PORCNQ9H237 461 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 DISP2A7MBM2 1401 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 SLC29A2Q14542 456 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 OR2W6PQ8NHA6 318 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 SLC2A14Q8TDB8 520 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 ZIM3Q96PE6 472 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 ECSITQ9BQ95 431 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 TAL1P17542 331 aaPredicted RBP16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 POLR2LP62875 67 aaKnown RBP16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 CDC16Q13042 620 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 GPR142Q7Z601 462 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 CYP2A6P11509 494 aaPredicted RBP16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 SERPINB10P48595 397 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 DAB2P98082 770 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 CCNG2Q16589 344 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 HORMAD1Q86X24 394 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 DDX42Q86XP3 938 aaKnown RBP eCLIP16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 REM2Q8IYK8 340 aaPredicted RBP16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 FBXO36Q8NEA4 188 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 B4GALNT2Q8NHY0 566 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 GANQ9H2C0 597 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms