RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ZDHHC11BP0C7U3 371 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 NCAM1P13591 858 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 TCP1P17987 556 aaKnown RBP13.64□□□□□ -0.23
CPNE3-205ENST00000522240 MTMR3Q13615 1198 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 PTPROQ16827 1216 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 DCAF6Q58WW2 860 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 BSPRYQ5W0U4 402 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 MSANTD2Q6P1R3 559 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 POLNQ7Z5Q5 900 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 SCD5Q86SK9 330 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 RHOT1Q8IXI2 618 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 UBL4BQ8N7F7 174 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 STKLD1Q8NE28 680 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 GIPC2Q8TF65 315 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 SLC22A17Q8WUG5 538 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 NDRG1Q92597 394 aaKnown RBP13.64□□□□□ -0.23
CPNE3-205ENST00000522240 PGAP3Q96FM1 320 aaPredicted RBP13.64□□□□□ -0.23
CPNE3-205ENST00000522240 CFAP57Q96MR6 1250 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 FAM161BQ96MY7 647 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 CDK5RAP1Q96SZ6 601 aaKnown RBP13.64□□□□□ -0.23
CPNE3-205ENST00000522240 CDCA3Q99618 268 aaPredicted RBP13.64□□□□□ -0.23
CPNE3-205ENST00000522240 CERS4Q9HA82 394 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 GMIPQ9P107 970 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.64□□□□□ -0.23
CPNE3-205ENST00000522240 A0A1W2PQH9 124 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 EPOPA6NHQ4 379 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 NCK2O43639 380 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 ENDOD1O94919 500 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 CSPG5O95196 566 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 FYNP06241 537 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 HMGA1P17096 107 aaKnown RBP13.63□□□□□ -0.23
CPNE3-205ENST00000522240 RDXP35241 583 aaKnown RBP13.63□□□□□ -0.23
CPNE3-205ENST00000522240 PPP3CCP48454 512 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 SULT1E1P49888 294 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 SLC25A11Q02978 314 aaKnown RBP13.63□□□□□ -0.23
CPNE3-205ENST00000522240 TAF10Q12962 218 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 DUSP6Q16828 381 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 HADHQ16836 314 aaKnown RBP13.63□□□□□ -0.23
CPNE3-205ENST00000522240 C15orf59Q2T9L4 293 aaPredicted RBP13.63□□□□□ -0.23
CPNE3-205ENST00000522240 OTUD1Q5VV17 481 aaPredicted RBP13.63□□□□□ -0.23
CPNE3-205ENST00000522240 SNX30Q5VWJ9 437 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 BTBD8Q5XKL5 378 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 CC2D1AQ6P1N0 951 aaPredicted RBP13.63□□□□□ -0.23
CPNE3-205ENST00000522240 CPNE8Q86YQ8 564 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 ZNF276Q8N554 614 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 MAFAQ8NHW3 353 aaPredicted RBP13.63□□□□□ -0.23
CPNE3-205ENST00000522240 GPR152Q8TDT2 470 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 FAM172AQ8WUF8 416 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 PPP2R3CQ969Q6 453 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 MRPL38Q96DV4 380 aaKnown RBP13.63□□□□□ -0.23
CPNE3-205ENST00000522240 OSBPL9Q96SU4 736 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 TBCBQ99426 244 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 CARD9Q9H257 536 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 SMOC2Q9H3U7 446 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 MAN1C1Q9NR34 630 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 OLA1Q9NTK5 396 aaKnown RBP13.63□□□□□ -0.23
CPNE3-205ENST00000522240 PACSIN2Q9UNF0 486 aaPredicted RBP13.63□□□□□ -0.23
CPNE3-205ENST00000522240 USTQ9Y2C2 406 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 PCDHA3Q9Y5H8 950 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 SAR1BQ9Y6B6 198 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 CHD9Q3L8U1 2897 aa13.63□□□□□ -0.23
CPNE3-205ENST00000522240 IGLV3-25P01717 112 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 KRT7P08729 469 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 HNRNPA1P09651 372 aaKnown RBP eCLIP13.62□□□□□ -0.23
CPNE3-205ENST00000522240 RALAP11233 206 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 TUBP50607 506 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 HDAC4P56524 1084 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 TAS2R40P59535 323 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 ATP11AP98196 1134 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 NNTQ13423 1086 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 TAF12Q16514 161 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 CDO1Q16878 200 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 PPM1LQ5SGD2 360 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 SYPL2Q5VXT5 272 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 KATNAL2Q8IYT4 538 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 ELMOD1Q8N336 334 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 ARFGAP1Q8N6T3 406 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 DQX1Q8TE96 717 aaKnown RBP13.62□□□□□ -0.23
CPNE3-205ENST00000522240 PBKQ96KB5 322 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 NMUR1Q9HB89 426 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.62□□□□□ -0.23
CPNE3-205ENST00000522240 ZDHHC7Q9NXF8 308 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 DDX56Q9NY93 547 aaKnown RBP13.62□□□□□ -0.23
CPNE3-205ENST00000522240 USP18Q9UMW8 372 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 MAGED2Q9UNF1 606 aaPredicted RBP13.62□□□□□ -0.23
CPNE3-205ENST00000522240 NAALADL1Q9UQQ1 740 aa13.62□□□□□ -0.23
CPNE3-205ENST00000522240 OBSL1O75147 1896 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 IRAK2O43187 625 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 PRPSAP2O60256 369 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 TADA3O75528 432 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 URI1O94763 535 aaPredicted RBP13.61□□□□□ -0.23
CPNE3-205ENST00000522240 PAPLNO95428 1278 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 F9P00740 461 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 MIPP30301 263 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 MARCKSL1P49006 195 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 PEX5P50542 639 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 AIF1P55008 147 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 RWDD2BP57060 319 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 DEUP1Q05D60 604 aa13.61□□□□□ -0.23
CPNE3-205ENST00000522240 DNAJB7Q7Z6W7 309 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms