RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 ZNF840PA6NDX5 716 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 SFI1A8K8P3 1242 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 CLDN3O15551 220 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 HOXC11O43248 304 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 PAPSS1O43252 624 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 HIP1RO75146 1068 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 SNRPBP14678 240 aaKnown RBP9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 ACTN2P35609 894 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 HNF1BP35680 557 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 GRIK1P39086 918 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 TPMTP51580 245 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 PDIA5Q14554 519 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 SHBQ15464 509 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 PRAMEF14Q5SWL7 426 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 KIAA1324Q6UXG2 1013 aaKnown RBP9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 GATAD2AQ86YP4 633 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 CHPFQ8IZ52 775 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 DCP1BQ8IZD4 617 aaKnown RBP9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 THEM5Q8N1Q8 247 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 TMEM161BQ8NDZ6 487 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 LEO1Q8WVC0 666 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 IGSF8Q969P0 613 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 P2RY11Q96G91 374 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 LGMNQ99538 433 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 ORAI3Q9BRQ5 295 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 RUSC1Q9BVN2 902 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 ABCB6Q9NP58 842 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 KMT5AQ9NQR1 393 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 GTF3C4Q9UKN8 822 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 DSEQ9UL01 958 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 RBM19Q9Y4C8 960 aaKnown RBP9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 SNX14Q9Y5W7 946 aa9.49□□□□□ -0.89
TRAPPC9-212ENST00000521944 E2F8A0AVK6 867 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 CLEC18AA5D8T8 446 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 ENC1O14682 589 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 SLC9A3R1O14745 358 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 SPINT1O43278 529 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 NEMFO60524 1076 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 RFPL3O75679 317 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 OAS1P00973 400 aaKnown RBP9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 IGLV3-19P01714 112 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 C1SP09871 688 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 MAPTP10636 758 aaKnown RBP9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 PAX3P23760 479 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 ACAT1P24752 427 aaKnown RBP9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 CTSKP43235 329 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 AFF3P51826 1226 aaKnown RBP9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 RPL10AP62906 217 aaKnown RBP9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 PPP2R3AQ06190 1150 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 NFATC3Q12968 1075 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 UBAP2LQ14157 1087 aaKnown RBP9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 NFE2Q16621 373 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 FUT11Q495W5 492 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 BLOC1S2Q6QNY1 142 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 CLEC18BQ6UXF7 455 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 ZPBP2Q6X784 338 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 ZNF574Q6ZN55 896 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 CLEC18CQ8NCF0 446 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 ZNF248Q8NDW4 579 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 DEC1Q9P2X7 70 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 LRWD1Q9UFC0 647 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 DOLKQ9UPQ8 538 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 CSMD1Q96PZ7 3565 aa9.48□□□□□ -0.89
TRAPPC9-212ENST00000521944 SUV39H1O43463 412 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 MAN1A2O60476 641 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 MYF5P13349 255 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 PFKLP17858 780 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 ITGB6P18564 788 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 CR2P20023 1033 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 CCR10P46092 362 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 CCT8P50990 548 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 RELBQ01201 579 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 GAD2Q05329 585 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 CFAP221Q4G0U5 840 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 HIST2H2BCQ6DN03 193 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 C1orf186Q6ZWK4 172 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 OSTM1Q86WC4 334 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 METTL23Q86XA0 190 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 CACTIN-AS1Q8N1I8 211 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 PDCL2Q8N4E4 241 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 DCBLD1Q8N8Z6 715 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 FSIP1Q8NA03 581 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 RFFLQ8WZ73 363 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 PSMG3-AS1Q96PY0 264 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 TSPAN18Q96SJ8 248 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 ACBD6Q9BR61 282 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 C6orf106Q9H6K1 298 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 TM9SF3Q9HD45 589 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 STARD5Q9NSY2 213 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 PCDHB1Q9Y5F3 818 aa9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC9-212ENST00000521944 A0A1B0GTQ1 180 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 KPNA7A9QM74 516 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 K7ENP7 123 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 GREM1O60565 184 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 LDOC1O95751 146 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 CISD3P0C7P0 127 aa9.46□□□□□ -0.9
TRAPPC9-212ENST00000521944 CDC25AP30304 524 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms