RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 GJA4P35212 333 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 PLA2G4AP47712 749 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 MFAP3P55082 362 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 STX17P56962 302 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 COG7P83436 770 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 TNK2Q07912 1038 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 BST2Q10589 180 aaKnown RBP10.73□□□□□ -0.69
TRIM35-204ENST00000521283 E2F5Q15329 346 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 CNGA2Q16280 664 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 HSF5Q4G112 596 aaPredicted RBP10.73□□□□□ -0.69
TRIM35-204ENST00000521283 ZNF394Q53GI3 561 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 RAB41Q5JT25 222 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 LCE2AQ5TA79 106 aaPredicted RBP10.73□□□□□ -0.69
TRIM35-204ENST00000521283 LCLAT1Q6UWP7 414 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 HTR3DQ70Z44 454 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 ALYREFQ86V81 257 aaKnown RBP10.73□□□□□ -0.69
TRIM35-204ENST00000521283 SCML4Q8N228 414 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 PPM1KQ8N3J5 372 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 KCTD13Q8WZ19 329 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 NELL1Q92832 810 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 CD101Q93033 1021 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 SLC22A12Q96S37 553 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 DCLK3Q9C098 648 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 RNF38Q9H0F5 515 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.73□□□□□ -0.694e-7■■■■■ 57.7
TRIM35-204ENST00000521283 OLA1Q9NTK5 396 aaKnown RBP10.73□□□□□ -0.69
TRIM35-204ENST00000521283 DNMT3LQ9UJW3 386 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 MED7O43513 233 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 BEST1O76090 585 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 MBD3O95983 291 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 LMNAP02545 664 aaKnown RBP10.72□□□□□ -0.69
TRIM35-204ENST00000521283 CSTF1Q05048 431 aaKnown RBP10.72□□□□□ -0.69
TRIM35-204ENST00000521283 GAD2Q05329 585 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 MTAPQ13126 283 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 ORC1Q13415 861 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 PON2Q15165 354 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 BTBD8Q5XKL5 378 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 PM20D1Q6GTS8 502 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 TMEM270Q6UE05 265 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 GBP6Q6ZN66 633 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 CAMKK1Q8N5S9 505 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 GPR161Q8N6U8 529 aaKnown RBP10.72□□□□□ -0.69
TRIM35-204ENST00000521283 UBR7Q8N806 425 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 ZNF511Q8NB15 262 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 ZBTB44Q8NCP5 570 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 LMO3Q8TAP4 145 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 SECISBP2LQ93073 1101 aaKnown RBP10.72□□□□□ -0.69
TRIM35-204ENST00000521283 ACDQ96AP0 544 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 CNOT6LQ96LI5 555 aaKnown RBP10.72□□□□□ -0.69
TRIM35-204ENST00000521283 TRIM62Q9BVG3 475 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 LRRC4Q9HBW1 653 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 LMBRD1Q9NUN5 540 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.72□□□□□ -0.69
TRIM35-204ENST00000521283 GMIPQ9P107 970 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 CFAP97Q9P2B7 532 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 TSPAN16Q9UKR8 245 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 STRIP2Q9ULQ0 834 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 CNTN6Q9UQ52 1028 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 PCDHB4Q9Y5E5 795 aa10.72□□□□□ -0.69
TRIM35-204ENST00000521283 A0A0A0MRY4 1105 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 SART1O43290 800 aaKnown RBP10.71□□□□□ -0.69
TRIM35-204ENST00000521283 LRRN2O75325 713 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 ZBED1O96006 694 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 TPM2P07951 284 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 RARGP13631 454 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 CD19P15391 556 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 CHKAP35790 457 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 MTIF2P46199 727 aaKnown RBP10.71□□□□□ -0.69
TRIM35-204ENST00000521283 SOX9P48436 509 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 GALK1P51570 392 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 SNX16P57768 344 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 ZNF445P59923 1031 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 LRMPQ12912 555 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 RIF1Q5UIP0 2472 aaKnown RBP10.71□□□□□ -0.69
TRIM35-204ENST00000521283 TRIM68Q6AZZ1 485 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 TXNDC11Q6PKC3 985 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 PIGZQ86VD9 579 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 MAML2Q8IZL2 1156 aaPredicted RBP10.71□□□□□ -0.69
TRIM35-204ENST00000521283 IRGQQ8WZA9 623 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 GOLGA1Q92805 767 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 ELMO3Q96BJ8 720 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 HSFY1Q96LI6 401 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 ARID3AQ99856 593 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 CCSER2Q9H7U1 834 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 CNGB3Q9NQW8 809 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 WDR35Q9P2L0 1181 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 NAGPAQ9UK23 515 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 WNT6Q9Y6F9 365 aa10.71□□□□□ -0.69
TRIM35-204ENST00000521283 ZFHX2Q9C0A1 2572 aaPredicted RBP10.71□□□□□ -0.7
TRIM35-204ENST00000521283 FAM186AA6NE01 2351 aa10.7□□□□□ -0.7
TRIM35-204ENST00000521283 PRR23AA6NEV1 266 aa10.7□□□□□ -0.7
TRIM35-204ENST00000521283 O00370 1275 aa10.7□□□□□ -0.7
TRIM35-204ENST00000521283 HOXC11O43248 304 aaPredicted RBP10.7□□□□□ -0.7
TRIM35-204ENST00000521283 LILRB5O75023 590 aa10.7□□□□□ -0.7
TRIM35-204ENST00000521283 FBXO21O94952 628 aa10.7□□□□□ -0.7
TRIM35-204ENST00000521283 ADH5P11766 374 aa10.7□□□□□ -0.7
TRIM35-204ENST00000521283 ARSAP15289 507 aa10.7□□□□□ -0.7
TRIM35-204ENST00000521283 EEF1GP26641 437 aaKnown RBP10.7□□□□□ -0.7
TRIM35-204ENST00000521283 ACADSBP45954 432 aa10.7□□□□□ -0.7
TRIM35-204ENST00000521283 TKTL1P51854 596 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms