RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CLCN1P35523 988 aa21.63■■□□□ 1.05
TRIM35-203ENST00000521253 OPRD1P41143 372 aa21.63■■□□□ 1.05
TRIM35-203ENST00000521253 RPL34P49207 117 aaKnown RBP21.63■■□□□ 1.05
TRIM35-203ENST00000521253 COG7P83436 770 aa21.63■■□□□ 1.05
TRIM35-203ENST00000521253 PTK2Q05397 1052 aa21.63■■□□□ 1.05
TRIM35-203ENST00000521253 DRAP1Q14919 205 aaPredicted RBP21.63■■□□□ 1.05
TRIM35-203ENST00000521253 FKBP15Q5T1M5 1219 aa21.63■■□□□ 1.05
TRIM35-203ENST00000521253 MAMSTRQ6ZN01 415 aa21.63■■□□□ 1.05
TRIM35-203ENST00000521253 FAM71AQ8IYT1 594 aa21.63■■□□□ 1.05
TRIM35-203ENST00000521253 ANKRD20A12PQ8NF67 263 aa21.63■■□□□ 1.05
TRIM35-203ENST00000521253 STK32AQ8WU08 396 aa21.63■■□□□ 1.05
TRIM35-203ENST00000521253 IRGQQ8WZA9 623 aa21.63■■□□□ 1.05
TRIM35-203ENST00000521253 PLCB1Q9NQ66 1216 aa21.63■■□□□ 1.05
TRIM35-203ENST00000521253 ST7Q9NRC1 585 aa21.63■■□□□ 1.05
TRIM35-203ENST00000521253 CYTH4Q9UIA0 394 aa21.63■■□□□ 1.05
TRIM35-203ENST00000521253 FBXO4Q9UKT5 387 aa21.63■■□□□ 1.05
TRIM35-203ENST00000521253 STRIP2Q9ULQ0 834 aa21.63■■□□□ 1.05
TRIM35-203ENST00000521253 FBXO21O94952 628 aa21.62■■□□□ 1.05
TRIM35-203ENST00000521253 HMBSP08397 361 aa21.62■■□□□ 1.05
TRIM35-203ENST00000521253 ADH5P11766 374 aa21.62■■□□□ 1.05
TRIM35-203ENST00000521253 CDK11BP21127 795 aaKnown RBP21.62■■□□□ 1.05
TRIM35-203ENST00000521253 KLK7P49862 253 aa21.62■■□□□ 1.05
TRIM35-203ENST00000521253 CSTF1Q05048 431 aaKnown RBP21.62■■□□□ 1.05
TRIM35-203ENST00000521253 Q6ZNB5 142 aa21.62■■□□□ 1.05
TRIM35-203ENST00000521253 SLC47A2Q86VL8 602 aa21.62■■□□□ 1.05
TRIM35-203ENST00000521253 TMEM25Q86YD3 366 aa21.62■■□□□ 1.05
TRIM35-203ENST00000521253 SPEM1Q8N4L4 309 aa21.62■■□□□ 1.05
TRIM35-203ENST00000521253 EZH1Q92800 747 aaPredicted RBP21.62■■□□□ 1.05
TRIM35-203ENST00000521253 BPIFA3Q9BQP9 254 aa21.62■■□□□ 1.05
TRIM35-203ENST00000521253 SLC4A5Q9BY07 1137 aa21.62■■□□□ 1.05
TRIM35-203ENST00000521253 MIS12Q9H081 205 aa21.62■■□□□ 1.05
TRIM35-203ENST00000521253 SPHK2Q9NRA0 654 aa21.62■■□□□ 1.05
TRIM35-203ENST00000521253 ABCC13Q9NSE7 274 aa21.62■■□□□ 1.05
TRIM35-203ENST00000521253 OLA1Q9NTK5 396 aaKnown RBP21.62■■□□□ 1.05
TRIM35-203ENST00000521253 SLC12A8A0AV02 714 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 LRRC10BA6NIK2 292 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 LGALS16A8MUM7 142 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 KLKB1P03952 638 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 NBL1P41271 181 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 ACADSBP45954 432 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 SLC6A11P48066 632 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 SATB1Q01826 763 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 GAD2Q05329 585 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 TSSK4Q6SA08 328 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 APTXQ7Z2E3 356 aaKnown RBP21.61■■□□□ 1.05
TRIM35-203ENST00000521253 C12orf40Q86WS4 652 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 SCUBE3Q8IX30 993 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 RNF139Q8WU17 664 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 FUCA2Q9BTY2 467 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 STK33Q9BYT3 514 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 GANQ9H2C0 597 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 PCDHGC3Q9UN70 934 aa21.61■■□□□ 1.05
TRIM35-203ENST00000521253 SYCE3A1L190 88 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 RNF40O75150 1001 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 LTFP02788 710 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 ATP1A3P13637 1013 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 CCR3P51677 355 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 PDCLQ13371 301 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 ANO4Q32M45 955 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 ZNF528Q3MIS6 628 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 PKN3Q6P5Z2 889 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 TMEM110Q86TL2 294 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 PASD1Q8IV76 773 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 FMNL3Q8IVF7 1028 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 DHX40Q8IX18 779 aaKnown RBP21.6■■□□□ 1.05
TRIM35-203ENST00000521253 WDTC1Q8N5D0 677 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 FAM207AQ9NSI2 230 aaPredicted RBP21.6■■□□□ 1.05
TRIM35-203ENST00000521253 C2orf42Q9NWW7 574 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 SFMBT1Q9UHJ3 866 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 SIK3Q9Y2K2 1263 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 ZFHX2Q9C0A1 2572 aaPredicted RBP21.6■■□□□ 1.05
TRIM35-203ENST00000521253 USP34Q70CQ2 3546 aa21.6■■□□□ 1.05
TRIM35-203ENST00000521253 E5RJQ4 531 aa21.59■■□□□ 1.05
TRIM35-203ENST00000521253 F8VZ95 297 aa21.59■■□□□ 1.05
TRIM35-203ENST00000521253 HOXC11O43248 304 aaPredicted RBP21.59■■□□□ 1.05
TRIM35-203ENST00000521253 PAPSS1O43252 624 aaPredicted RBP21.59■■□□□ 1.05
TRIM35-203ENST00000521253 TDGF1P13385 188 aa21.59■■□□□ 1.05
TRIM35-203ENST00000521253 PTMSP20962 102 aa21.59■■□□□ 1.05
TRIM35-203ENST00000521253 CORO1AP31146 461 aaKnown RBP21.59■■□□□ 1.05
TRIM35-203ENST00000521253 EIF2DP41214 584 aaKnown RBP21.59■■□□□ 1.05
TRIM35-203ENST00000521253 CXCL12P48061 93 aa21.59■■□□□ 1.05
TRIM35-203ENST00000521253 BPIFB4P59827 614 aa21.59■■□□□ 1.05
TRIM35-203ENST00000521253 MESP2Q0VG99 397 aa21.59■■□□□ 1.05
TRIM35-203ENST00000521253 FBXO43Q4G163 708 aa21.59■■□□□ 1.05
TRIM35-203ENST00000521253 GOLGA1Q92805 767 aa21.59■■□□□ 1.05
TRIM35-203ENST00000521253 LHX5Q9H2C1 402 aa21.59■■□□□ 1.05
TRIM35-203ENST00000521253 TJP2Q9UDY2 1190 aa21.59■■□□□ 1.05
TRIM35-203ENST00000521253 R4GN57 208 aa21.59■■□□□ 1.05
TRIM35-203ENST00000521253 WDR87Q6ZQQ6 2873 aa21.58■■□□□ 1.05
TRIM35-203ENST00000521253 EPHB6O15197 1021 aa21.58■■□□□ 1.05
TRIM35-203ENST00000521253 SART1O43290 800 aaKnown RBP21.58■■□□□ 1.05
TRIM35-203ENST00000521253 CYP11B1P15538 503 aa21.58■■□□□ 1.05
TRIM35-203ENST00000521253 KRT9P35527 623 aa21.58■■□□□ 1.05
TRIM35-203ENST00000521253 ZNF165P49910 485 aa21.58■■□□□ 1.05
TRIM35-203ENST00000521253 SYCP1Q15431 976 aa21.58■■□□□ 1.05
TRIM35-203ENST00000521253 TRIP4Q15650 581 aaPredicted RBP21.58■■□□□ 1.05
TRIM35-203ENST00000521253 MSANTD2Q6P1R3 559 aa21.58■■□□□ 1.05
TRIM35-203ENST00000521253 ETFBKMTQ8IXQ9 262 aa21.58■■□□□ 1.05
TRIM35-203ENST00000521253 NAT16Q8N8M0 369 aa21.58■■□□□ 1.05
TRIM35-203ENST00000521253 C1orf131Q8NDD1 294 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms