RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 SFTPA1Q8IWL2 248 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 NAT16Q8N8M0 369 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 MLKLQ8NB16 471 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 GAB3Q8WWW8 586 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 HHIPQ96QV1 700 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 ULBP1Q9BZM6 244 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 LRRC4Q9HBW1 653 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 MARK1Q9P0L2 795 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 WDR35Q9P2L0 1181 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 DEC1Q9P2X7 70 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 MMP17Q9ULZ9 603 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 ZNF510Q9Y2H8 683 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 RALGAPA1Q6GYQ0 2036 aa17.89■□□□□ 0.46
SQLE-205ENST00000521232 AXIN1O15169 862 aa17.89■□□□□ 0.45
SQLE-205ENST00000521232 RPP40O75818 363 aaKnown RBP17.89■□□□□ 0.45
SQLE-205ENST00000521232 APBB3O95704 486 aa17.89■□□□□ 0.45
SQLE-205ENST00000521232 ANP32AP39687 249 aaKnown RBP17.89■□□□□ 0.45
SQLE-205ENST00000521232 ID4P47928 161 aa17.89■□□□□ 0.45
SQLE-205ENST00000521232 ZNF132P52740 706 aa17.89■□□□□ 0.45
SQLE-205ENST00000521232 STILQ15468 1287 aa17.89■□□□□ 0.45
SQLE-205ENST00000521232 HSF5Q4G112 596 aaPredicted RBP17.89■□□□□ 0.45
SQLE-205ENST00000521232 CEP68Q76N32 757 aa17.89■□□□□ 0.45
SQLE-205ENST00000521232 MIB1Q86YT6 1006 aa17.89■□□□□ 0.45
SQLE-205ENST00000521232 SCML4Q8N228 414 aa17.89■□□□□ 0.45
SQLE-205ENST00000521232 SLC35F5Q8WV83 523 aa17.89■□□□□ 0.45
SQLE-205ENST00000521232 KREMEN1Q96MU8 473 aa17.89■□□□□ 0.45
SQLE-205ENST00000521232 ZSWIM1Q9BR11 485 aa17.89■□□□□ 0.45
SQLE-205ENST00000521232 CLSTN2Q9H4D0 955 aa17.89■□□□□ 0.45
SQLE-205ENST00000521232 CNTN6Q9UQ52 1028 aa17.89■□□□□ 0.45
SQLE-205ENST00000521232 TBC1D3BA6NDS4 549 aa17.88■□□□□ 0.45
SQLE-205ENST00000521232 LRP3O75074 770 aa17.88■□□□□ 0.45
SQLE-205ENST00000521232 KLKB1P03952 638 aa17.88■□□□□ 0.45
SQLE-205ENST00000521232 KDSRQ06136 332 aa17.88■□□□□ 0.45
SQLE-205ENST00000521232 EFEMP1Q12805 493 aa17.88■□□□□ 0.45
SQLE-205ENST00000521232 CRY1Q16526 586 aa17.88■□□□□ 0.45
SQLE-205ENST00000521232 EMC10Q5UCC4 262 aa17.88■□□□□ 0.45
SQLE-205ENST00000521232 CACNA2D4Q7Z3S7 1137 aa17.88■□□□□ 0.45
SQLE-205ENST00000521232 IRF2BP1Q8IU81 584 aa17.88■□□□□ 0.45
SQLE-205ENST00000521232 CCDC33Q8N5R6 958 aa17.88■□□□□ 0.45
SQLE-205ENST00000521232 FAM160A2Q8N612 972 aaPredicted RBP17.88■□□□□ 0.45
SQLE-205ENST00000521232 IL17RCQ8NAC3 791 aa17.88■□□□□ 0.45
SQLE-205ENST00000521232 RBBP8NLQ8NC74 664 aaPredicted RBP17.88■□□□□ 0.45
SQLE-205ENST00000521232 KCNV2Q8TDN2 545 aa17.88■□□□□ 0.45
SQLE-205ENST00000521232 NDRG1Q92597 394 aaKnown RBP17.88■□□□□ 0.45
SQLE-205ENST00000521232 XPO6Q96QU8 1125 aaKnown RBP17.88■□□□□ 0.45
SQLE-205ENST00000521232 DCLK3Q9C098 648 aa17.88■□□□□ 0.45
SQLE-205ENST00000521232 INTS2Q9H0H0 1204 aaKnown RBP17.88■□□□□ 0.45
SQLE-205ENST00000521232 PARD6AQ9NPB6 346 aa17.88■□□□□ 0.45
SQLE-205ENST00000521232 RASAL2Q9UJF2 1139 aa17.88■□□□□ 0.45
SQLE-205ENST00000521232 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.88■□□□□ 0.45
SQLE-205ENST00000521232 CACNG3O60359 315 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 GABBR2O75899 941 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 TYRP14679 529 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 TIE1P35590 1138 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 ADIGQ0VDE8 80 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 PMF1Q6P1K2 205 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 TPGS1Q6ZTW0 290 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 NUDT18Q6ZVK8 323 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 RSRC2Q7L4I2 434 aaKnown RBP17.87■□□□□ 0.45
SQLE-205ENST00000521232 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.87■□□□□ 0.45
SQLE-205ENST00000521232 RASSF3Q86WH2 238 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 ALLCQ8N6M5 410 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 TERB1Q8NA31 727 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 TXNDC5Q8NBS9 432 aaKnown RBP17.87■□□□□ 0.45
SQLE-205ENST00000521232 TSTD1Q8NFU3 115 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 LOXL4Q96JB6 756 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 ZC3H10Q96K80 434 aaKnown RBP17.87■□□□□ 0.45
SQLE-205ENST00000521232 CNOT6LQ96LI5 555 aaKnown RBP17.87■□□□□ 0.45
SQLE-205ENST00000521232 IPO9Q96P70 1041 aaKnown RBP17.87■□□□□ 0.45
SQLE-205ENST00000521232 BBS2Q9BXC9 721 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 UBE2TQ9NPD8 197 aaPredicted RBP17.87■□□□□ 0.45
SQLE-205ENST00000521232 CNGB3Q9NQW8 809 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 OLA1Q9NTK5 396 aaKnown RBP17.87■□□□□ 0.45
SQLE-205ENST00000521232 MARCH2Q9P0N8 246 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 STRIP2Q9ULQ0 834 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 STARD13Q9Y3M8 1113 aa17.87■□□□□ 0.45
SQLE-205ENST00000521232 CACNA1AO00555 2505 aa17.86■□□□□ 0.45
SQLE-205ENST00000521232 YJEFN3A6XGL0 299 aa17.86■□□□□ 0.45
SQLE-205ENST00000521232 E7ENQ6 273 aa17.86■□□□□ 0.45
SQLE-205ENST00000521232 NEDD8-MDP1E9PL57 170 aa17.86■□□□□ 0.45
SQLE-205ENST00000521232 TRIM24O15164 1050 aa17.86■□□□□ 0.45
SQLE-205ENST00000521232 KLF8O95600 359 aaPredicted RBP17.86■□□□□ 0.45
SQLE-205ENST00000521232 BRD2P25440 801 aaKnown RBP17.86■□□□□ 0.45
SQLE-205ENST00000521232 CHKAP35790 457 aa17.86■□□□□ 0.45
SQLE-205ENST00000521232 DGKEP52429 567 aa17.86■□□□□ 0.45
SQLE-205ENST00000521232 SPEM2Q0P670 501 aa17.86■□□□□ 0.45
SQLE-205ENST00000521232 BSPRYQ5W0U4 402 aa17.86■□□□□ 0.45
SQLE-205ENST00000521232 TMEM92Q6UXU6 159 aa17.86■□□□□ 0.45
SQLE-205ENST00000521232 SIX6OS1Q8N1H7 587 aa17.86■□□□□ 0.45
SQLE-205ENST00000521232 RMDN1Q96DB5 314 aa17.86■□□□□ 0.45
SQLE-205ENST00000521232 HSFY1Q96LI6 401 aa17.86■□□□□ 0.45
SQLE-205ENST00000521232 ABCC13Q9NSE7 274 aa17.86■□□□□ 0.45
SQLE-205ENST00000521232 FBXO10Q9UK96 956 aa17.86■□□□□ 0.45
SQLE-205ENST00000521232 SLC12A8A0AV02 714 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 SGK1O00141 431 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 ADAM23O75077 832 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 CALCAP01258 141 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 HMBSP08397 361 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 CISD3P0C7P0 127 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 LCP1P13796 627 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms