RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.91□□□□□ -0.98
VAPB-206ENST00000520497 FBXW11Q9UKB1 542 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 YIPF1Q9Y548 306 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 MYOFQ9NZM1 2061 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 UNC80Q8N2C7 3258 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 A0A0C4DFX4 3053 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 HIDE1A8MVS5 230 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 H3BNC9 293 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 CCDC188H7C350 402 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 ZNF185O15231 689 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 GRM6O15303 877 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 TGM5O43548 720 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 CEP104O60308 925 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 RNF8O76064 485 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 CXCL14O95715 111 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 C1RP00736 705 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 YWHAQP27348 245 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 IL1R2P27930 398 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 MIPP30301 263 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 CXCR5P32302 372 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 PGFP49763 221 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 HDAC4P56524 1084 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 PITX1P78337 314 aaPredicted RBP8.9□□□□□ -0.98
VAPB-206ENST00000520497 MTMR3Q13615 1198 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 SMC1AQ14683 1233 aaKnown RBP8.9□□□□□ -0.98
VAPB-206ENST00000520497 RAB30Q15771 203 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 SLC25A52Q3SY17 297 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 RAB6CQ53S08 254 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 DCAF6Q58WW2 860 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 SH3PXD2AQ5TCZ1 1133 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 SYPL2Q5VXT5 272 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 PLPP4Q5VZY2 271 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 BSPRYQ5W0U4 402 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 TXNRD3NBQ6F5E7 133 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 STRADAQ7RTN6 431 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 ZNF572Q7Z3I7 529 aaPredicted RBP8.9□□□□□ -0.98
VAPB-206ENST00000520497 SCD5Q86SK9 330 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 RHOT1Q8IXI2 618 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 KATNAL2Q8IYT4 538 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 RASGEF1CQ8N431 466 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 MRPL43Q8N983 215 aaKnown RBP8.9□□□□□ -0.98
VAPB-206ENST00000520497 GPR152Q8TDT2 470 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 FAM172AQ8WUF8 416 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 TIFAQ96CG3 184 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 PGAP3Q96FM1 320 aaPredicted RBP8.9□□□□□ -0.98
VAPB-206ENST00000520497 TRMT2BQ96GJ1 504 aaKnown RBP8.9□□□□□ -0.98
VAPB-206ENST00000520497 MYRFLQ96LU7 910 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 PEBP4Q96S96 227 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 TBCBQ99426 244 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 TRIM62Q9BVG3 475 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 RAB6CQ9H0N0 254 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 NGRNQ9NPE2 291 aaKnown RBP8.9□□□□□ -0.98
VAPB-206ENST00000520497 ENTPD7Q9NQZ7 604 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 RRN3Q9NYV6 651 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 CALCOCO1Q9P1Z2 691 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 MTUS1Q9ULD2 1270 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 STAP1Q9ULZ2 295 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 USP18Q9UMW8 372 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 USTQ9Y2C2 406 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 INSL5Q9Y5Q6 135 aa8.9□□□□□ -0.98
VAPB-206ENST00000520497 DENND4AQ7Z401 1863 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 SLC38A8A6NNN8 435 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 RFXAPO00287 272 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 PDE2AO00408 941 aaPredicted RBP8.89□□□□□ -0.99
VAPB-206ENST00000520497 TRUB2O95900 331 aaKnown RBP8.89□□□□□ -0.99
VAPB-206ENST00000520497 IGLV3-25P01717 112 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 ADH1AP07327 375 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 KRT7P08729 469 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 ZDHHC11BP0C7U3 371 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 NCAM1P13591 858 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 HMGA1P17096 107 aaKnown RBP8.89□□□□□ -0.99
VAPB-206ENST00000520497 IRS1P35568 1242 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 PSEN1P49768 467 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 SULT1E1P49888 294 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 CLCN4P51793 760 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 RWDD2BP57060 319 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 YWHAGP61981 247 aaKnown RBP eCLIP8.89□□□□□ -0.99
VAPB-206ENST00000520497 ATP11AP98196 1134 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 IFRD2Q12894 506 aaPredicted RBP8.89□□□□□ -0.99
VAPB-206ENST00000520497 GPM6BQ13491 265 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 EIF4EBP2Q13542 120 aaPredicted RBP8.89□□□□□ -0.99
VAPB-206ENST00000520497 ELF2Q15723 593 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 CCDC85BQ15834 202 aaPredicted RBP8.89□□□□□ -0.99
VAPB-206ENST00000520497 HADHQ16836 314 aaKnown RBP8.89□□□□□ -0.99
VAPB-206ENST00000520497 CDO1Q16878 200 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 ERCC6LQ2NKX8 1250 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 MAP9Q49MG5 647 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 GLE1Q53GS7 698 aaKnown RBP8.89□□□□□ -0.99
VAPB-206ENST00000520497 PDE12Q6L8Q7 609 aaKnown RBP8.89□□□□□ -0.99
VAPB-206ENST00000520497 MSANTD2Q6P1R3 559 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 RSRC2Q7L4I2 434 aaKnown RBP8.89□□□□□ -0.99
VAPB-206ENST00000520497 MON1AQ86VX9 555 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 ZNF276Q8N554 614 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 EXD1Q8NHP7 514 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 ACTRT1Q8TDG2 376 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 OVCA2Q8WZ82 227 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 FBXO32Q969P5 355 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 RUNDC3BQ96NL0 473 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 SMOC2Q9H3U7 446 aa8.89□□□□□ -0.99
VAPB-206ENST00000520497 NMUR1Q9HB89 426 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms