RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 DDAH2O95865 285 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 IGHV4-34P06331 123 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 GIMD1P0DJR0 217 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 NR1D1P20393 614 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 MARCKSP29966 332 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 RPL9P32969 192 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 HSPA4P34932 840 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 ADD1P35611 737 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 TUFMP49411 452 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 RAB15P59190 212 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 OSTNP61366 133 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 GRIN1Q05586 938 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 TFDP1Q14186 410 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 VEPH1Q14D04 833 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 SAFBQ15424 915 aaKnown RBP eCLIP7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 FOXD4L5Q5VV16 416 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 CDCA2Q69YH5 1023 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 FOXR1Q6PIV2 292 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 TRMT11Q7Z4G4 463 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 SPATS2Q86XZ4 545 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 FAM114A1Q8IWE2 563 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 MCEMP1Q8IX19 187 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 SLC25A45Q8N413 288 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 ETNPPLQ8TBG4 499 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 CCDC136Q96JN2 1154 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 SLC12A9Q9BXP2 914 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 RNF38Q9H0F5 515 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 ZCWPW1Q9H0M4 648 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 ZNF395Q9H8N7 513 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 CASS4Q9NQ75 786 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 BARHL2Q9NY43 387 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 MN1Q10571 1320 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 STK36Q9NRP7 1315 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 CSPG4Q6UVK1 2322 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 JMJD1CQ15652 2540 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 DFNA5O60443 496 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 SDC3O75056 442 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 TDP2O95551 362 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 THEGLP0DJG4 465 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 KCNE1P15382 129 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 TGM2P21980 687 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 CD27P26842 260 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 SLC5A2P31639 672 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 YWHABP31946 246 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 GUCY2FP51841 1108 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 PDX1P52945 283 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 DDR2Q16832 855 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 CCDC142Q17RM4 750 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 EIF2S3LQ2VIR3 472 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 XKR9Q5GH70 373 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 OVOS1Q6IE37 1185 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 TMEM25Q86YD3 366 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 TMPRSS6Q8IU80 811 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 MB21D2Q8IYB1 491 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 ADGRF2Q8IZF7 708 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 GALNT11Q8NCW6 608 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 LURAP1Q96LR2 239 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 PRIMPOLQ96LW4 560 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 DSCC1Q9BVC3 393 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 NUP58Q9BVL2 599 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 POLR3FQ9H1D9 316 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 PRMT7Q9NVM4 692 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 SMPD4Q9NXE4 827 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 VAV3Q9UKW4 847 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 OBSL1O75147 1896 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 MYOFQ9NZM1 2061 aa7.29□□□□□ -1.24
CTNNA1-216ENST00000519489 LRRIQ4A6NIV6 560 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 SYNCRIPO60506 623 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 NOL4O94818 638 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 FSBPO95073 299 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 NFICP08651 508 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 CYP21A2P08686 494 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 HDCP19113 662 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 SDSP20132 328 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 OXTRP30559 389 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 GNAQP50148 359 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 MCCD1P59942 119 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 KCNMA1Q12791 1236 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 ORC1Q13415 861 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 PRPF4BQ13523 1007 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 TAF12Q16514 161 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 SV2AQ7L0J3 742 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 TMC6Q7Z403 805 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 TEX2Q8IWB9 1127 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 ZNF592Q92610 1267 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 SIPA1Q96FS4 1042 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 MYRFLQ96LU7 910 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 LXNQ9BS40 222 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 GZF1Q9H116 711 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 CNTN3Q9P232 1028 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 LRWD1Q9UFC0 647 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 TUBD1Q9UJT1 453 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 PPME1Q9Y570 386 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 STON1Q9Y6Q2 735 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 DENND4CQ5VZ89 1909 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 KIF26BQ2KJY2 2108 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 ACANP16112 2415 aa7.28□□□□□ -1.24
CTNNA1-216ENST00000519489 KIAA1324LA8MWY0 1029 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-216ENST00000519489 C10orf142B7Z368 130 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms